Job Description P60560 Confidence 89.13% Date Thu Jan 5 12:06:53 GMT 2012 Rank 257 Aligned Residues 205 % Identity 15% Template c1vs1B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-deoxy-7-phosphoheptulonate synthase; PDBTitle: crystal structure of 3-deoxy-d-arabino-heptulosonate-7-2 phosphate synthase (dahp synthase) from aeropyrum pernix3 in complex with mn2+ and pep Resolution 2.30 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.												.	.	.	80
Predicted Secondary structure																																																.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	P	K	R	S	T	L	K	S	R	S	D	V	E	L	E	R	Q	F	T	F	K	H	S	G	Q	S	W	S	G	V	P	I	I	A	A	N	M	D	T	V	G	T	F	S	.	.	.	.	M	A	S	A	L	A	S	F	D	I	L	T	A	V	H	.	.	.	.	.	.	.	.	.	.	.	K	H	Y	S
Query Conservation																																																.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.															.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.
Template Sequence		F	K	G	V	K	L	A	L	K	S	E	E	R	R	E	T	V	V	E	V	E	G	V	R	I	G	G	G	S	.	.	.	K	A	V	I	A	G	P	C	S	V	E	S	W	E	Q	V	R	E	A	A	L	A	V	K	E	A	G	A	H	M	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	L
Template Known Secondary structure				S		S	T	T	B			S	S		S							T	T				B	T	T	B	.	.	.								S	B																		T		S					B	S	S				S	S	T	T	S
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	E	W	Q	A	F	I	N	N	S	S	A	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	G	N	V	V
Query Conservation
Alig confidence																						.	.	.	.	.	.																.																								.	.	.	.	.
Template Conservation																						.	.	.	.	.	.																.																								.	.	.	.	.
Template Sequence		G	L	E	G	L	K	L	L	R	R	A	G	D	E	A	G	L	P	V	V	.	.	.	.	.	.	T	E	V	L	D	P	R	H	V	E	T	V	S	R	Y	.	A	D	M	L	Q	I	G	A	R	N	M	Q	N	F	P	L	L	R	E	V	G	R	S	.	.	.	.	.	G	K	P	V	L	L	K	R	G	F
Template Known Secondary structure		T															T					.	.	.	.	.	.						G	G	G								.		S						G	G	G	T	T												.	.	.	.	.										T
Template Predicted Secondary structure																						.	.	.	.	.	.																.																								.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.
				161	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.			.	.	.	.
Predicted Secondary structure		.	.										.	.	.	.																																																		.	.	.	.							.	.
Query SS confidence		.	.										.	.	.	.																																																		.	.	.	.							.	.
Query Sequence		.	.	T	G	E	M	C	E	E	L	I	.	.	.	.	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G	L	G	G	M	I	V	S	.	.	.	.	D	G	G	C	T	T	.	.	P	G	D	V
Query Conservation		.	.										.	.	.	.																																																		.	.	.	.							.	.
Alig confidence		.	.										.	.	.	.																																				.	.	.	.	.	.									.	.	.	.							.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		G	N	T	V	E	E	L	L	A	A	A	E	Y	I	L	L	E	G	N	W	Q	V	V	L	V	E	R	G	I	R	T	F	E	P	S	T	R	F	T	L	D	V	A	A	V	A	V	L	K	E	.	.	.	.	.	.	A	T	H	L	P	V	I	V	D	P	S	H	P	A	G	R	R	S	L	V	P	A	L	A
Template Known Secondary structure		T																T	T											B			S			S	S	S	S	B												.	.	.	.	.	.		B	S	S												S	G	G	G
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	A	F	G	G	G	A	D	F	V	M	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	G	L	A	A	G	A	D	G	L	I	V
Template Known Secondary structure							T	T		S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions