Job Description P60560 Confidence 28.98% Date Thu Jan 5 12:06:53 GMT 2012 Rank 495 Aligned Residues 89 % Identity 15% Template c1njjC_ PDB info PDB header:lyase Chain: C: PDB Molecule:ornithine decarboxylase; PDBTitle: crystal structure determination of t. brucei ornithine2 decarboxylase bound to d-ornithine and to g418 Resolution 2.45 Å

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		Y	S	E	H	F	V	Q	F	V	A	K	A	R	E	A	W	P	T	K	T	I	C	A	.	.	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	G
Query Conservation																									.	.
Alig confidence																									.	.																		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																												.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	G	D	I	V	R	K	H	E	T	W	K	K	C	L	P	R	V	T	P	F	Y	A	V	K	C	N	D	D	W	R	V	L	G	T	L	A	A	L	G	T	.	G	F	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	N	T	E	I	Q	R	V	R	G	I
Template Known Secondary structure																		T	T							G	G	G													T	T		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S										T
Template Predicted Secondary structure																																												.					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.																						90	.	.	.	.	.	.	.	.	.	100	.
		212	.	.	.			.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		L	G	G	M	.	.	I	V	S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G	M
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		G	V	P	P	E	K	I	I	Y	A	N	P	C	K	Q	I	S	H	I	R	Y	A	R	D	S	G	V	D	V	M	T	F	D	C	V
Template Known Secondary structure		T			G	G	G						S	S													T								S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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