Job Description P60560 Confidence 100.00% Date Thu Jan 5 12:06:53 GMT 2012 Rank 8 Aligned Residues 321 % Identity 29% Template c1me9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:inosine-5'-monophosphate dehydrogenase; PDBTitle: inosine monophosphate dehydrogenase (impdh) from2 tritrichomonas foetus with imp bound Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.									.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																							.																						.	.	.	.	.	.	.	.
Query SS confidence																							.																						.	.	.	.	.	.	.	.
Query Sequence		R	I	E	E	D	L	K	L	G	F	K	D	V	L	I	R	P	K	R	S	T	.	L	K	S	R	S	D	V	E	L	E	R	Q	F	T	F	K	H	S	G	Q	S	.	.	.	.	.	.	.	.	W	S	G	V	P	I	I	A	A	N	M	D	T	V	G	T	F	S	M	A	S	A	L	A	S	F	D	I	L
Query Conservation																							.																						.	.	.	.	.	.	.	.
Alig confidence																							.														.	.	.	.	.				.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		K	Y	Y	N	E	P	C	H	T	F	N	E	Y	L	L	I	P	G	L	S	T	V	D	C	I	P	S	N	V	N	L	S	T	P	L	.	.	.	.	.	V	K	F	Q	K	G	Q	Q	S	E	I	N	L	K	I	P	L	V	S	A	I	M	Q	S	V	S	G	E	K	M	A	I	A	L	A	R	E	G	G	I
Template Known Secondary structure					S	S					G	G	G										T	T			G	G	G		B						.	.	.	.	.	S				T	T				S				S	S	S					S		T	T	T		S											T
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		T	A	V	H	K	H	Y	S	V	E	E	W	Q	A	F	I	N	N	S	S	A	.	.	.	.	.	.	.	.	D	V	L	K	H	V	M	V	S	T	G	T	S	D	A	D	F	E	K	T	K	Q	I	L	D	L	N	P	A	L	N	F	V	C	I	D	V	A	N	G	Y	S	E	H	F	V	Q	F	V	A	K
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																						.
Template Conservation																																																				.
Template Sequence		S	F	I	F	G	S	Q	S	I	E	S	Q	A	A	M	V	H	A	V	K	N	F	K	A	H	N	E	L	V	D	S	Q	K	R	Y	L	V	G	A	G	I	N	T	R	D	F	R	E	R	V	.	P	A	L	V	E	A	G	A	D	V	L	C	I	D	S	S	D	G	F	S	E	W	Q	K	I	T	I	G	W
Template Known Secondary structure							S	S														T	T	T						B		T	T	S		B								S	S	S						.							T		S							S				S
Template Predicted Secondary structure																																																				.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		145	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210							.	.	.	.	.	.	.
Predicted Secondary structure								.																																																													.	.	.	.	.	.
Query SS confidence								.																																																													.	.	.	.	.	.
Query Sequence		A	R	E	A	W	P	.	T	K	T	I	C	A	G	N	V	V	T	G	E	M	C	E	E	L	I	L	S	G	A	D	I	V	K	V	G	I	G	P	G	S	V	C	T	T	R	V	K	T	G	V	G	Y	P	Q	L	S	A	V	I	E	C	A	D	A	A	H	.	.	.	.	.	.	G	L	G	G	M	I	V
Query Conservation								.																																																													.	.	.	.	.	.
Alig confidence								.																																			.																										.	.	.	.	.	.
Template Conservation																																											.
Template Sequence		I	R	E	K	Y	G	D	K	V	K	V	G	A	G	N	I	V	D	G	E	G	F	R	Y	L	A	D	A	G	A	D	F	I	K	I	G	I	G	G	G	S	.	I	I	T	R	E	Q	K	G	I	G	R	G	Q	A	T	A	V	I	D	V	V	A	E	R	N	K	Y	F	E	E	T	G	I	Y	I	P	V	C
Template Known Secondary structure							G	G	G	S									S										T	T		S						S	S		S		.				T	T	T	T																									S
Template Predicted Secondary structure																																											.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	G	G	C	T	T	P	G	D	V	A	K	A	F	G	G	G	A	D	F	V	M	L	G	G	M	L	A	G	H	E	E	S	G	G	R	I	V	E	E	N	G	E	K	F	M	L	F	Y	G	M	S	S	E	S	A	M	K	R	H	V	G	G	V	A	E	Y	R	A	A	E	G	K	T	V	K	L	P	L
Query Conservation
Alig confidence																																																													.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.
Template Sequence		S	D	G	G	I	V	Y	D	Y	H	M	T	L	A	L	A	M	G	A	D	F	I	M	L	G	R	Y	F	A	R	F	E	E	S	P	T	R	K	V	T	I	N	G	S	V	M	K	E	Y	W	G	E	G	S	S	R	A	R	N	.	.	.	.	.	.	.	.	.	W	F	E	E	G	V	D	S	Y	V	P	Y
Template Known Secondary structure				S				S										T	T		S					S					T	B	T	T	S	S	S						T	T									T	T	S						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.										.	.	.	.	420	.	.	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	P	V	E	N	T	A	R	D	I	L	G	G	L	R	S	A	C	T	Y	V	G	A	S	R	L	K	E	L	T	K	R	T	T	F	I	R	V	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	K	L	K	D	N	V	E	A	S	L	N	K	V	K	S	T	M	C	N	C	G	A	L	T	I	P	Q	L	Q	S	K	A	K	I	T	L	V	S	S
Template Known Secondary structure			B																				T	T		S	B															T
Template Predicted Secondary structure
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions