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Job DescriptionP38134
Confidence99.67%DateThu Jan 5 11:58:01 GMT 2012
Rank34Aligned Residues180
% Identity14%Templatec3igfB_
PDB info PDB header:atp binding proteinChain: B: PDB Molecule:all4481 protein; PDBTitle: crystal structure of the all4481 protein from nostoc sp. pcc 7120,2 northeast structural genomics consortium target nsr300
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   533......540.........550.........560.........570.........580.........590... ......600......
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Query Sequence  ILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAG. . . . KDELNKVIQHFGK. .
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Template Sequence  LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGLA. . EPVLPLLLEQTLTPDPQQIAPNLEVVQFQSSVLLERNWEEV
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   3......10.........20.........30......... 40.........50.........60.........70.........80
 
   607..610.........620.........630......... 640.........650.........660.....
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Query Sequence  . GGFDVITRGQVPPNPSELLMRDRMRQLLEWAND. . . . . . . HYDLVIVDTPPMLAVSDAAVVGRSVG. . . . . . . . . . . . .
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Template Sequence  KKLEAQYTPIIKEVYGQELVVLPGXDSALALNAIREYDASGKYDTIVYDGTGDAFTLRXLGLPESLSWYVRRFRQLFVNS
Template Known Secondary structure  TTTT


SSSS

GGG



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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   666...670.........680.........690.........700.........710....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . TSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGVIKRASTAYSYG
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Template Sequence  DLGKQPTNQVNNFLDKGKEALADPKRVAAFLVTTADPLEVVSVRYLWGSAQQIGLTIGGVIQVSSQTEGDLSAEFT
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   163......170.........180.........190.........200.........210.........220.........230........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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