Job Description P38134 Confidence 99.82% Date Thu Jan 5 11:58:01 GMT 2012 Rank 18 Aligned Residues 241 % Identity 13% Template c3ezfA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:para; PDBTitle: partition protein Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	F	I	S	V	G	A	V	L	A	R	A	M	L	R	R	G	V	E	A	P	E	Q	L	E	E	H	G	I	S	V	Y	A	T	I	P	M	S	E	W	L	D	K	R	T	R	L	R	K	K	N	L	F	S	N	Q	Q	R	H	R	T	K	N	I	P	F	L	A	V	D	N	P	A	D	S	A	V	E
Query Conservation
Alig confidence																															.	.	.	.																																					.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.																																					.	.	.	.	.	.	.	.
Template Sequence		V	G	T	I	A	L	R	A	S	A	L	L	K	A	M	S	Y	Y	Q	T	F	T	R	N	A	V	A	K	L	.	.	.	.	P	K	L	S	R	R	I	V	D	Q	A	I	K	E	M	E	E	D	G	Y	Q	F	N	K	K	Q	V	G	N	V	E	Q	Y	A	L	T	.	.	.	.	.	.	.	.	I	Q	N
Template Known Secondary structure															T	T													T	S	.	.	.	.	T	T																T	S							B		S	S	S	B						.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.																																					.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.					.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.									.	.	.
		514	.	.	.	.	.	520	.			.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.				.	.	.
Predicted Secondary structure										.	.																																																																	.	.	.
Query SS confidence										.	.																																																																	.	.	.
Query Sequence		A	V	R	A	L	R	T	S	.	.	L	H	F	A	M	M	E	T	E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	Q	K	V	L	F	I	D	A	D	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	.	.	.	G	L	S
Query Conservation										.	.																																																																	.	.	.
Alig confidence										.	.																																	.	.															.																.	.	.
Template Conservation																																												.	.															.
Template Sequence		V	I	D	I	Y	A	H	R	K	I	P	K	Y	R	D	I	H	K	S	P	Y	V	I	F	V	V	N	L	S	T	V	T	L	A	H	A	L	R	V	H	Q	D	.	.	L	L	R	H	D	L	R	I	L	V	I	D	L	D	.	P	Q	A	S	S	T	M	F	L	G	S	I	L	E	T	A	A	Q	A	M	L
Template Known Secondary structure									T	T				G	G	G	T	S		S																						G	G	.	.	G	G	G	G											.	T	T		T	T	T	T	T
Template Predicted Secondary structure																																												.	.															.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.														.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G	K	G	G	F	D	V	I	T	R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	R	Q	L	L	E	W	A	N	D	H	Y	D	L	V	I	V	D	T	P	P	M	L	A	V	S
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation																																																																																	.
Template Sequence		N	N	L	D	A	E	T	L	R	K	E	V	I	R	P	T	I	V	P	G	V	D	V	I	P	A	S	I	D	D	G	F	V	A	S	Q	W	R	E	L	V	E	E	H	L	P	G	Q	N	Q	Y	E	I	L	R	R	N	I	I	D	R	V	A	D	D	Y	D	F	I	F	I	D	T	G	P	H	L	D	P	.
Template Known Secondary structure		T	T									T	T	S	B			S	S	T	T								S	S						T	T									S	T	T			T	T	T						T	T	T	T	S	G	G	G		S								S	S				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		656	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	V	V	G	R	S	V	G	T	S	L	L	V	A	R	F	G	L	N	T	A	K	E	V	S	L	S	M	Q	R	L	E	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	L	N	G	L	A	A	S	D	L	L	L	T	P	T	P	P	A	Q	V	D	F	H	S	T	L	K	Y	L	T	R	L	P	E
Template Known Secondary structure								T	T		S									S												T	T
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions