Job Description P38134 Confidence 87.78% Date Thu Jan 5 11:58:01 GMT 2012 Rank 278 Aligned Residues 92 % Identity 23% Template c3cmwA_ PDB info PDB header:recombination/dna Chain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	Q	K	V	L	F	I	D	A	D	.	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	G	L	S	E	Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G	K	G	G
Query Conservation																																										.
Alig confidence													.																													.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	G	R	I	V	E	I	Y	G	P	E	.	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	I	D	N
Template Known Secondary structure		T	T	S							S	T	.	T	S	S															T	T								T	T	S										T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure													.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1058	.	1060	.	.	.	.	.	.	.	.		.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.																								.	1110	.	.	.
		609	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	V	I	T	R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	R	M	R	Q	L	L	E	W	A	N	D	H	Y	D	L	V	I	V	D	T	P	P	M	L	A
Query Conservation
Alig confidence					.	.	.	.											.	.									.	.
Template Conservation					.	.	.	.											.	.									.	.
Template Sequence		L	L	C	.	.	.	.	S	Q	P	D	T	G	E	Q	A	L	.	.	E	I	C	D	A	L	A	R	.	.	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T
Template Known Secondary structure					.	.	.	.				S	S						.	.									.	.		T			S					S		S	T	T
Template Predicted Secondary structure					.	.	.	.											.	.									.	.
Template SS confidence
		1114	.	.					.	.	.	1120	.	.	.	.	.	.			.	.	.	1130	.	.	.	.			.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions