Job Description P38134 Confidence 96.95% Date Thu Jan 5 11:58:01 GMT 2012 Rank 87 Aligned Residues 129 % Identity 19% Template c3cmvG_ PDB info PDB header:recombination Chain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 4.30 Å

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		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	Q	K	V	L	F	I	D	A	D	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	G	L	S	E	Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G	K	G	G	F
Query Conservation
Alig confidence													.																													.	.	.	.	.	.	.	.	.	.	.												.	.														.	.	.
Template Conservation													.																													.	.	.	.	.	.	.	.	.	.	.												.	.														.	.	.
Template Sequence		M	G	R	I	V	E	I	Y	G	P	E	.	S	S	G	K	T	T	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	.	.	.	.	.	.	.	.	.	.	.	H	A	L	D	P	I	Y	A	R	K	L	.	.	G	V	D	I	D	N	L	L	C	S	Q	P	D	.	.	.
Template Known Secondary structure		T	T	S								T	.	T	S	S														T	T	S								T	T	.	.	.	.	.	.	.	.	.	.	.	S											.	.	T			G	G	G				B			S	.	.	.
Template Predicted Secondary structure													.																													.	.	.	.	.	.	.	.	.	.	.												.	.														.	.	.
Template SS confidence
		3058	.	3060	.	.	.	.	.	.	.	.		.	3070	.	.	.	.	.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.												.	.	.	3100	.	.	.	.	.	.	.			.	.	3110	.	.	.	.	.	.	.	.	.	3120
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640			.	.	.	.	.	.	.					.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.
Predicted Secondary structure																																	.	.								.	.	.	.
Query SS confidence																																	.	.								.	.	.	.
Query Sequence		D	V	I	T	R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	R	M	R	Q	L	L	E	W	A	N	D	H	.	.	Y	D	L	V	I	V	D	.	.	.	.	T	P	P	M	L	A	V	S	D	A	A	V	V	G	R	S	V	G	T	S	L	L	V	A	R	F	G	L	N	T	A	K	E	V	S	L
Query Conservation																																	.	.								.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.								.	.	.	.				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	R	M	M	S	Q	A	M	R	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S														S	S	S							T	T	G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		3121	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.																						.	.	.	.	.	.	.	.	3160	.	.	.
		684	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	M	Q	R	L	E	Q	A	G	V	N	I	K	G	A	I	L	N	G	V	I	K	R	A	S	T	A	Y	S	Y	G	Y	N	Y	Y	G	Y	S	Y	S	E	K
Query Conservation
Alig confidence										.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	A	G	N	L	K	Q	S	.	.	N	T	L	L	I	F	I	N	Q	.	.	.	.	.	.	.	.	.	.	.	G	G	N	A	L	K	F	Y	A	S	V	R
Template Known Secondary structure										.	.										.	.	.	.	.	.	.	.	.	.	.			S	T						S
Template Predicted Secondary structure										.	.										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3178	.	3180	.	.	.	.	.			.	.	.	.	3190	.	.	.	.												.	.	.	.	.	3200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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