Return to main results Retrieve Phyre Job Id

Job DescriptionP38134
Confidence97.53%DateThu Jan 5 11:58:01 GMT 2012
Rank73Aligned Residues121
% Identity17%Templatec2vyeA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:replicative dna helicase; PDBTitle: crystal structure of the dnac-ssdna complex
Resolution4.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   520.........530.........540.........550....... ..560.........570...... ...580.........590......
Predicted Secondary structure 













.










.












.
Query SS confidence 





































.


















.



















.
Query Sequence  TSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIA. QSDQKVLFIDADLRRGYSH. NLFTVSNEHGLSEYLAGKDE.
Query Conservation    
           
 


    




 
  

   
.  
 





 


   
 .         

   
     .
Alig confidence 





































.


















.



















.
Template Conservation    

   

   
 
  
 
  
 


      
   
      

  
 
        
                    
Template Sequence  TELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTP
Template Known Secondary structure  SSB
TT


STTTS
SSSS
T

TT


Template Predicted Secondary structure 





























Template SS confidence 















































































   191........200.........210.........220.........230.........240.........250.........260.........270
 
   597..600.........610.........620.........630.........640. .......
Predicted Secondary structure  .....















..

Query SS confidence  . . . . .












































. .






Query Sequence  . . . . . LNKVIQHFGKGGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHY. . DLVIVDT
Query Conservation  .....    
       
 

  
        

        
  
   
..
 



 
Alig confidence  .....



















........
















..






Template Conservation              
      
     ........         
          




 
Template Sequence  EDWGKLTMAMGSLSNAGIYIDDTPS. . . . . . . . IRVSDIRAKCRRLKQESGLGMVVIDY
Template Known Secondary structure  TS



SS........
BT

Template Predicted Secondary structure 





........






Template SS confidence 


























































   271........280.........290..... ....300.........310.........320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions