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Job DescriptionP38134
Confidence99.51%DateThu Jan 5 11:58:01 GMT 2012
Rank41Aligned Residues169
% Identity18%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   506...510.........520... ......530.........540.........550.........560.........570.........
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Query Sequence  NPADSAVEAVRALRTSLH. . . . . . FAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLF
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Template Sequence  RDAEALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVN. GVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQL
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BGGGTT






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   262.......270.........280.........290.........300.. .......310.........320.........330.........340
 
   580.........590.........600.........610.........620.........630.........640.........650.......
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Query Sequence  TVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDA. .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . QVWGQRNNIPVIAQ. HTGADSASVI. . . . FDAIQAAKARNIDVLIADTAGRLQNKSHLM
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   341........350.... .....360.... .....370.........380.........390....
 
   658.660.... .....670.........680.........690.........700....
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Query Sequence  . . . AVVGRSV. . . . . . . . GTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGVI
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Template Sequence  EELKKIVRVMKKLDVEAPHEVMLTIDAS. TGQNAVSQAKLFHEAV. . GLTGITLTKLD
Template Known Secondary structure  TTT
TT

SGG.GTS..




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   395....400.........410.........420.. .......430........ .440.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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