Job Description P38134 Confidence 98.29% Date Thu Jan 5 11:58:01 GMT 2012 Rank 58 Aligned Residues 142 % Identity 21% Template c2px0D_ PDB info PDB header:biosynthetic protein Chain: D: PDB Molecule:flagellar biosynthesis protein flhf; PDBTitle: crystal structure of flhf complexed with gmppnp/mg(2+) Resolution 3.00 Å

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		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		M	E	T	E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	.	D	Q	K	V	L	F	I	D	A	D	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	G	L	S	E	Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G
Query Conservation																																			.
Alig confidence																.																			.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	P	I	H	S	K	Y	I	V	L	F	G	S	T	.	G	A	G	K	T	T	T	L	A	K	L	A	A	I	S	M	L	E	K	H	K	K	I	A	F	I	T	T	D	T	Y	R	I	A	A	V	E	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	T	Y	A	E
Template Known Secondary structure				S		S	S	B							S	.	S	S																T	S												S	S	T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T
Template Predicted Secondary structure																.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.																						.	.	.	.	.
		606	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.			.	660	.	.	.	.	.						.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.								.	.	.	.	.
Query SS confidence																																																							.	.								.	.	.	.	.
Query Sequence		K	G	G	F	D	V	I	T	R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	R	M	R	Q	L	L	E	W	A	N	D	H	Y	D	L	V	I	V	D	T	P	P	M	L	A	V	S	D	A	A	.	.	V	V	G	R	S	V	G	.	.	.	.	.	T	S	L	L	V	A	R	F	G	L	N	T	A
Query Conservation																																																							.	.								.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.																.																			.	.								.	.	.	.	.							.
Template Conservation											.	.	.	.	.	.	.	.	.	.																.																																							.
Template Sequence		L	L	Q	A	P	L	E	V	C	.	.	.	.	.	.	.	.	.	.	Y	T	K	E	E	F	Q	Q	A	K	E	L	F	S	E	.	Y	D	H	V	F	V	D	T	A	G	R	N	F	K	D	P	Q	Y	I	D	E	L	K	E	T	I	P	F	E	S	S	I	Q	S	F	L	V	L	.	S	A	T	A	K	Y
Template Known Secondary structure			T	T							.	.	.	.	.	.	.	.	.	.	S	S										T	T	T	T	.	S	S												S	S	G	G	G	T							S				T	T	B							.		T	T	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																.																																							.
Template SS confidence
		229	230	.	.	.	.	.	.	.											.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	V	S	L	S	M	Q	R	L	E	Q	A	G	V	N	I	K	G	A	I	L	N	G	V	I
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		E	D	M	K	H	I	V	K	R	F	S	S	V	.	.	P	V	N	Q	Y	I	F	T	K	I	D
Template Known Secondary structure					T	T	T	T	T	T	S	S	S	S	.	.										T	T
Template Predicted Secondary structure															.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.			310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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