Job Description P38134 Confidence 97.51% Date Thu Jan 5 11:58:01 GMT 2012 Rank 74 Aligned Residues 122 % Identity 25% Template c2npiB_ PDB info PDB header:transcription Chain: B: PDB Molecule:protein clp1; PDBTitle: clp1-atp-pcf11 complex Resolution 2.95 Å

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		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.		.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560		.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																																			.
Query SS confidence																	.																																			.
Query Sequence		V	E	A	V	R	A	L	R	T	S	L	H	F	A	M	.	M	E	T	E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	.	Q	K	V	L	F	I	D	A	D	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	G	L	S	E
Query Conservation																	.																																			.
Alig confidence																	.															.																				.															.	.	.	.											.
Template Conservation																																.																																			.	.	.	.											.
Template Sequence		X	K	Y	I	Y	N	L	H	F	X	L	E	K	I	R	X	S	N	F	E	G	P	R	V	V	I	V	G	G	S	.	Q	T	G	K	T	S	L	S	R	T	L	C	S	Y	A	L	K	F	N	A	Y	Q	P	L	Y	I	N	L	D	P	Q	Q	P	I	.	.	.	.	F	T	V	P	G	C	I	S	A	T	.
Template Known Secondary structure																			S	S	S									S	T	.	T	S	S															T	T											T	T	S		S	.	.	.	.	B	S		T	T						.
Template Predicted Secondary structure																																.																																			.	.	.	.											.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.
		590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.																					.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Query Sequence		Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	D	V	I	T	R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	R	M	R	Q	L	L	E	W	A	N	D	H	Y	D	L	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	P	I	S	D	I	L	D	A	Q	L	P	T	W	G	Q	S	L	T	S	G	A	T	L	L	H	N	K	Q	P	X	V	K	N	F	G	L	E	R	I	N	E	N	K	D	L	Y	L	E	C	I	S	Q	L	G	Q	V	V	G	Q	R	L	H	L	D	P	Q	V	R	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.				S				T	T		T	T		S	B	B			S	S			S	S			B									S	S	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
													177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
				644	.	.	.	.	.	650
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	I	V	D	T	P	P
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		S	G	C	I	V	D	T	P	S
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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