 |
Job Description | P38134 | Confidence | 80.23% | Date | Thu Jan 5 11:58:01 GMT 2012 |
Rank | 436 | Aligned Residues | 58 |
% Identity | 22% | Template | c2d7dA_ |
PDB info |
PDB header:hydrolase/dna | Chain: A: PDB Molecule:uvrabc system protein b; |
PDBTitle: structural insights into the cryptic dna dependent atp-ase2 activity of uvrb
|
Resolution | 2.10 Å |
|
 |
  |   |
500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | L | A | V | D | N | P | A | D | S | A | V | E | A | V | R | A | L | R | T | S | L | H | F | A | M | M | E | T | E | N | N | I | L | M | I | T | G | A | T | P | D | S | G | K | T | F | V | S | S | T | L | A | A | V | I | A | Q | S | D | Q | K | V | L | F | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|
|
|
|
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |   | . |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   | . | . | . |   |   |   |   |
|
|
|
Template Sequence |   |
E | L | V | S | K | Y | Q | P | Q | G | D | Q | P | K | A | I | E | K | L | V | K | G | I | Q | . |
. |
. |
. |
. |
E | G | K | K | H | Q | T | L | L | G | A | . |
T | G | T | G | K | T | F | T | V | S | N | L | I | K | E | V | . |
. |
. |
N | K | P | T | L | V | I |
Template Known Secondary structure |   |
|
|
|
| S |
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | T | T |
| S |  |  |  |  |  |  |
| . | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
. | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|