Job Description P38134 Confidence 99.43% Date Thu Jan 5 11:58:01 GMT 2012 Rank 42 Aligned Residues 172 % Identity 21% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	D	S	A	V	E	A	V	R	A	L	R	T	S	L	H	F	A	M	M	E	T	E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	Q	K	V	L	F	I	D	A	D	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	G
Query Conservation
Alig confidence																																			.																																								.	.	.	.	.	.	.
Template Conservation																																			.																																								.	.	.	.	.	.	.
Template Sequence		G	R	K	D	L	K	E	A	V	K	E	K	L	V	G	M	L	E	P	P	V	E	P	K	G	R	V	V	L	V	V	G	V	.	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y	Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	A	A	G	G	T	Q	L	.	.	.	.	.	.	.
Template Known Secondary structure				S		S												T							S	S	S							S	.	T	T	S	S														T	T	T											S	S	T	T						.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.																																								.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		587	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		L	S	E	Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G	K	G	G	F	D	V	I	T	R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	R	M	R	Q	L	L	E	W	A	N	D	H	Y	D	L	V	I	V	D	T	P	P	M	L	A	V	S	D	A	A	V	V	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.											.	.	.	.																																	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.											.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	.	P	E	G	T	D	P	A	A	L	A	.	.	.	.	Y	D	A	V	Q	A	M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.								T							.		T	T	S							.	.	.	.										T	T		S											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.															.											.	.	.	.
Template SS confidence
																150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
										662	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	R	S	V	G	T	S	L	L	V	A	R	F	G	L	N	T	A	K	E	V	S	L	S	M	Q	R	L	E	Q	A	G	V	N	I	K	G	A	I	L	N	G	V	I	K	R	A	S
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.														.																	.	.
Template Conservation																							.																	.	.
Template Sequence		R	A	I	A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D	A	V	.	T	G	Q	N	G	L	E	Q	A	K	K	F	H	E	A	V	.	.	G	L	T	G	V	I	V	T	K	L	D	G	T	A	K
Template Known Secondary structure									T	T											T	T	.			T														.	.			S							T	T	S	S
Template Predicted Secondary structure																							.																	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions