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Job DescriptionP38134
Confidence96.26%DateThu Jan 5 11:58:01 GMT 2012
Rank97Aligned Residues117
% Identity21%Templatec2bvnB_
PDB info PDB header:elongation factorChain: B: PDB Molecule:elongation factor tu; PDBTitle: e. coli ef-tu:gdpnp in complex with the antibiotic2 enacyloxin iia
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   527..530.........540.........550.........560.........570.........580.........590.........600......
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Query Sequence  METENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGK
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Template Sequence  ERTKPHVNVGTIGHVDHGKTTLTAAI. . . . . . . . . . . . . . . . . . . . . . TTVLAKTYGARGI. . . . . . . . . . . . . . . . TIN
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TT................TTS
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   6...10.........20.........30. ........40.... ...
 
   607..610.........620.........630.........640.........650... ......660.........670.........680.....
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Query Sequence  GGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLA. VSDAAVVGRSVGTSLLVARFGLNTAKEVSLSM
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Template Sequence  TSHVEYDTP. . . . . . . . . . . . . . . . . . . . . . . . TRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI
Template Known Secondary structure  TT
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SGGGTT
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TTT
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   64.....70.. .......80.........90.........100.........110.........
 
   686...690.........700.....
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Query Sequence  QRLEQAGVNIKGAILNGVIK
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Template Sequence  LLGRQVGVPYIIVFLNKCDM
Template Known Secondary structure  T



GGG
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   120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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