Job Description P38134 Confidence 97.13% Date Thu Jan 5 11:58:01 GMT 2012 Rank 82 Aligned Residues 152 % Identity 15% Template c1u9iA_ PDB info PDB header:circadian clock protein Chain: A: PDB Molecule:kaic; PDBTitle: crystal structure of circadian clock protein kaic with phosphorylation2 sites Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	Q	K	V	L	F	I	D	A	D	L	R	R	G	Y	S	H	N	L	F	T	V	S	N	E	H	G	L	S	E	Y	L	A	G	K	D	E	L	N	K	V	I	Q	H	F	G	K	G	G	F
Query Conservation
Alig confidence												.																																								.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																																								.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	S	I	I	L	A	T	G	A	.	T	G	T	G	K	T	L	L	V	S	R	F	V	E	N	A	C	A	N	K	E	R	A	I	L	F	A	Y	E	E	S	R	A	Q	L	L	R	N	A	.	Y	S	W	G	M	D	F	E	E	M	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	N	L	L
Template Known Secondary structure		S	S									.	T	T	S	S														T	T	T								S	S	S										.		T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure												.																																								.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340														.	.	.	.
		610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640		.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		D	V	I	T	R	G	Q	V	P	P	N	P	S	E	L	L	M	R	D	R	M	R	Q	L	L	E	W	A	N	D	H	.	Y	D	L	V	I	V	D	T	P	P	M	L	A	V	S	D	A	A	V	V	G	R	S	V	G	T	S	L	L	V	A	R	F	G	L	N	T	A	K	E	V	S	L	S	M	Q	R	L
Query Conservation																																	.
Alig confidence							.	.	.	.	.																						.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	C	A	.	.	.	.	.	Y	P	E	S	A	G	L	E	D	H	L	Q	I	I	K	S	E	I	N	D	F	K	P	A	R	I	A	I	D	S	L	S	A	L	A	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	S	N	N	A	F	R	Q	F	V	I	G	V	T	G	Y	A
Template Known Secondary structure							.	.	.	.	.		G	G	G	S															T	T			S											T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure							.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.						350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		689	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	A	G	V	N	I	K	G	A	I	L	N	G	V	I	K	R	A	S	T	A	Y	S	Y	G	Y	N	Y	Y	G
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		K	Q	E	E	I	T	G	L	.	.	F	T	N	T	S	D	Q	F	M	G	A	H	S	I	T	D	S	H	I	I	T
Template Known Secondary structure				T	T					.	.						S	S	S	S				S	S		S	S
Template Predicted Secondary structure										.	.
Template SS confidence
		404	.	.	.	.	.	410	.			.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions