Job Description P38134 Confidence 87.26% Date Thu Jan 5 11:58:01 GMT 2012 Rank 293 Aligned Residues 78 % Identity 14% Template c1sxjB_ PDB info PDB header:replication Chain: B: PDB Molecule:activator 1 37 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna) Resolution 2.85 Å

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		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	F	S	N	Q	Q	R	H	R	T	K	N	I	P	F	L	A	V	D	N	P	A	D	S	A	V	E	A	V	R	A	L	R	T	S	L	H	F	A	M	M	E	T	E	N	N	I	L	M	I	T	G	A	T	P	D	S	G	K	T	F	V	S	S	T	L	A	A	V	I	A	Q	S	D	Q	K	V	L	F
Query Conservation
Alig confidence																							.	.	.	.	.	.												.	.	.	.												.
Template Conservation																							.	.	.	.	.	.												.	.	.	.												.
Template Sequence		L	Q	L	P	W	V	E	K	Y	R	P	Q	V	L	S	D	I	V	G	N	K	.	.	.	.	.	.	E	T	I	D	R	L	Q	Q	I	A	K	.	.	.	.	D	G	N	M	P	H	M	I	I	S	G	.	M	P	G	I	G	K	T	T	S	V	H	C	L	A	H	E	L	L	G	R	S	Y	A	D	G	V
Template Known Secondary structure										T			S	S	G	G	G			S		T	.	.	.	.	.	.												.	.	.	.	S											.	S	T	T	S	S														G	G	G
Template Predicted Secondary structure																							.	.	.	.	.	.												.	.	.	.												.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		566	.	.	.	570	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	D	L	R	R	G	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	L	N	A	S	D	D	R
Template Known Secondary structure						T	T	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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