Job Description P0AGI1 Confidence 47.44% Date Thu Jan 5 11:29:13 GMT 2012 Rank 3 Aligned Residues 186 % Identity 13% Template d1u7ga_ SCOP info Ammonium transporter Ammonium transporter Ammonium transporter Resolution 1.40

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60							.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																						.	.	.	.	.	.									.
Query SS confidence																																																						.	.	.	.	.	.									.
Query Sequence		R	R	Y	F	T	K	A	W	L	M	E	Q	K	S	L	I	A	L	L	V	L	I	A	I	V	S	T	L	S	P	N	F	F	T	I	N	N	L	F	N	I	L	Q	Q	T	S	V	N	A	I	M	A	.	.	.	.	.	.	V	G	M	T	L	V	I	L	.	T	S	G	I	D	L	S	V	G	S	L	L	A
Query Conservation																																																						.	.	.	.	.	.									.
Alig confidence																																																						.	.	.	.	.	.									.
Template Conservation
Template Sequence		V	G	F	G	K	E	A	F	K	P	H	N	L	P	X	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	F	N	A	G	S	A	G	T	A	N	E	I	A	A	L	A	F	V	N	T	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	L	P	S	L	L	G	A	C	S	G	A
Template Known Secondary structure				T	T		S	S			G	G	G																					G	G	G	S	S	S	S																														S	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.				.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		L	T	G	A	V	A	A	S	I	V	G	I	E	V	N	A	L	V	A	V	A	A	A	L	A	L	G	A	A	I	G	A	V	T	G	V	I	V	A	K	G	R	V	Q	A	.	.	.	F	I	A	T	L	V	M	M	L	L	L	R	G	V	T	M	V	Y	T	N	G	S	P	V	N	T	G	F	T	E	N	A
Query Conservation																																															.	.	.
Alig confidence																																															.	.	.
Template Conservation
Template Sequence		I	A	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G	V	T	X	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	X	T	G	I	F	A	A	S	S	L	G	G	V	G	F	A	E	G
Template Known Secondary structure									T	T	T	T	T	T	S																													S			G	G	G																				T	S	G	G	G	T						T	T
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	F	G	W	F	G	I	G	R	P	L	G	V	P	T	P	V	W	I	M	G	I	V	F	L	A	A	W	Y	M	L	H	H	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	X	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K	L	A	D	L	T	V
Template Known Secondary structure																																					T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions