 |
Job Description | P0AGI1 | Confidence | 3.09% | Date | Thu Jan 5 11:29:13 GMT 2012 |
Rank | 48 | Aligned Residues | 35 |
% Identity | 14% | Template | d1mn8a_ |
SCOP info | Retroviral matrix proteins
| Retroviral matrix proteins
| MMLV matrix protein-like
|
Resolution | 1.00 |
|
  |   |
191 | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | H | T | R | L | G | R | Y | I | Y | A | L | G | G | N | E | A | A | T | R | L | S | G | I | N | V | N | K | I | K | I | I | V | Y | S |
Query Conservation |   |
  |
|
|   |   |
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|
|
Template Sequence |   |
V | T | T | P | L | S | L | T | L | G | H | W | K | D | V | E | R | I | A | H | N | Q | S | V | D | V | K | K | R | R | W | V | T | F | C |
Template Known Secondary structure |   |
|
|
|  |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|