Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGI1
Confidence3.09%DateThu Jan 5 11:29:13 GMT 2012
Rank48Aligned Residues35
% Identity14%Templated1mn8a_
SCOP infoRetroviral matrix proteins Retroviral matrix proteins MMLV matrix protein-like
Resolution1.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   191........200.........210.........220.....
Predicted Secondary structure 









Query SS confidence 


































Query Sequence  HHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYS
Query Conservation   

  
  



  
   
   

 
      

 
Alig confidence 


































Template Conservation   



 
 
   
  
      
  
 
  
  

Template Sequence  VTTPLSLTLGHWKDVERIAHNQSVDVKKRRWVTFC
Template Known Secondary structure 


TTT



Template Predicted Secondary structure 











Template SS confidence 


































   5....10.........20.........30.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions