Job Description P0AGI1 Confidence 2.79% Date Thu Jan 5 11:29:13 GMT 2012 Rank 62 Aligned Residues 65 % Identity 8% Template c3rkoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-quinone oxidoreductase subunit a; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																								.	.	.
Query SS confidence																								.	.	.
Query Sequence		R	R	Y	F	T	K	A	W	L	M	E	Q	K	S	L	I	A	L	L	V	L	I	.	.	.	A	I	V	S	T	L	S	P	N	F	F	T	I	N	N	L	F	N	I	L	Q	Q	T	S	V	N	A	I	M	A	V	G	M	T	L	V	I	L	T	S	G	I	D
Query Conservation																								.	.	.
Alig confidence																								.	.	.
Template Conservation
Template Sequence		R	A	R	A	R	L	R	L	S	A	K	F	Y	L	V	A	M	F	F	V	I	F	D	V	E	A	L	Y	L	F	A	W	S	T	S	I	R	E	S	G	W	V	G	F	V	E	A	A	I	F	I	F	V	L	L	A	G	L	V	Y	L	V	R	I	G	A	L	D
Template Known Secondary structure																																				S	S	T	T	T																										T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions