Job Description P0AGI1 Confidence 2.51% Date Thu Jan 5 11:29:13 GMT 2012 Rank 77 Aligned Residues 158 % Identity 8% Template c3dh4A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: crystal structure of sodium/sugar symporter with bound galactose from2 vibrio parahaemolyticus Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	Y	F	T	K	A	W	L	M	E	Q	K	S	L	I	A	L	L	V	L	I	A	I	V	S	T	L	S	P	N	F	F	T	I	N	N	L	F	N	I	L	Q	Q	T	S	V	N	A	I	M	A	V	G	M	T	L	V	I	L	T	S	G	I	D	L	S	V	G	S	L	L	A	L	T	G	A	V	A	A
Query Conservation
Alig confidence																																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	C	L	I	A	P	M	L	G	G	I	G	Q	.	.	.	A	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S		S	S																					G	G	G	G	G	G		S		.	.	.										T	T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.				.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		S	I	V	G	I	E	V	N	A	L	V	A	V	A	A	A	L	A	L	G	A	A	I	G	A	V	T	G	V	I	V	A	K	G	R	.	V	Q	A	F	I	A	T	L	V	M	M	L	L	L	R	G	V	T	M	V	Y	T	N	G	S	P	V	N	T	G	F	T	E	N	A	D	L	F	G	W	F	G	I	G
Query Conservation																																					.
Alig confidence		.	.	.																																	.
Template Conservation		.	.	.
Template Sequence		.	.	.	F	W	K	K	T	T	S	K	G	A	I	I	G	V	V	A	S	I	P	F	A	L	F	L	K	F	M	P	L	S	M	P	F	M	D	Q	M	L	Y	T	L	L	F	T	M	V	V	I	A	F	T	S	L	S	T	S	I	N	D	D	D	P	K	G	I	S	V	T	S	S	M	F	V	T	D	R	S
Template Known Secondary structure		.	.	.			T	T																						T	S	S	S																									T	T		S	S	S	S		T	T							S						T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					447	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	L	G	V	P	T	P	V	W	I	M	G	I	V	F	L	A	A	W	Y	M	L	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	N	I	A	A	Y	G	I	M	I	V	L	A	V	L	Y	T	L	F	W	V	L	Y	K
Template Known Secondary structure																						T	T
Template Predicted Secondary structure
Template SS confidence
		524	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions