 |
Job Description | P0AGI1 | Confidence | 2.46% | Date | Thu Jan 5 11:29:13 GMT 2012 |
Rank | 83 | Aligned Residues | 36 |
% Identity | 14% | Template | c2x2vG_ |
PDB info |
PDB header:membrane protein | Chain: G: PDB Molecule:atp synthase subunit c; |
PDBTitle: structural basis of a novel proton-coordination type in an2 f1fo-atp synthase rotor ring
|
Resolution | 2.50 Å |
|
  |   |
195 | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | R | Y | I | Y | A | L | G | G | N | E | A | A | T | R | L | S | G | I | N | V | N | K | I | K | I | I | V | Y | S | L | C | G | L | L | A | S | L | A |
Query Conservation |   |
  |
|   |   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |
|
|   |
|
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   | . | . | . | . |   |
|   |
|   |
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |
Template Sequence |   |
V | K | A | T | I | E | G | T | T | R | Q | P | E | L | R | G | . |
. |
. |
. |
T | L | Q | T | L | M | F | I | G | V | P | L | A | E | A | V | P | I | I | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| G | G | G |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|