Job Description P0AGI1 Confidence 98.37% Date Thu Jan 5 11:29:13 GMT 2012 Rank 1 Aligned Residues 224 % Identity 11% Template c2nq2A_ PDB info PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	G	S	L	L	A	L	T	G	A	V	A	A	S	I	V	G	I	E	V	N	A	L	V	A	V	A	A	A	L	A	L	G	A	A	I	G	A	V	T	G	V	I	V	A	K	G	R	V	Q	A	F	I	A	T	L	V	M	M	L	L	L	R	G	V	T	M	V	Y	T	N	G	S	P	V	N	T	G
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		I	G	V	T	S	G	S	A	F	G	G	T	L	A	I	F	.	.	.	F	G	F	S	L	Y	G	L	F	T	S	T	I	L	F	G	F	G	T	L	A	L	V	F	L	F	S	F	K	S	L	L	M	L	I	L	I	G	M	I	L	S	G	L	F	S	A	L	V	S	L	L	Q	Y	I	S	D	T	E	E	K
Template Known Secondary structure		T	S															.	.	.	T	T																										T																											S	S		T	T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	E	N	A	D	L	F	G	W	F	G	I	G	R	P	L	G	V	P	T	P	V	W	I	M	G	I	V	F	L	A	A	W	Y	M	L	H	H	T	R	L	G	R	Y	I	Y	A	L	G	G	N	E	A	A	T	R	L	S	G	I	N	V	N	K	I	K	I	I	V	Y	S	L	C	G	L	L	A	S	L
Query Conservation
Alig confidence																																									.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		L	P	S	I	V	F	W	L	M	G	S	F	A	T	S	N	W	E	K	L	L	F	F	F	V	P	F	L	L	C	S	S	I	L	L	S	L	S	W	.	.	.	.	.	R	L	N	L	L	S	L	D	E	K	E	A	K	A	L	G	V	K	M	A	P	L	R	W	L	V	I	F	L	S	G	S	L	V	A	C
Template Known Secondary structure									T	T			S	T	T																							T	T	T	.	.	.	.	.	G	G	G	G	G	G	S								T	T
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		234	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																																																									.	.	.
Query SS confidence							.	.																																																									.	.	.
Query Sequence		A	G	I	I	E	.	.	V	A	R	L	S	S	A	Q	P	T	A	G	T	G	Y	E	L	D	A	I	A	A	V	V	L	G	G	T	S	L	A	G	G	K	G	R	I	V	G	T	L	I	G	A	L	I	L	G	F	L	N	N	G	L	N	L	.	.	.	L	G	V	S	S	Y	Y	Q	M	I	V	K	A	V
Query Conservation							.	.																																																									.	.	.
Alig confidence							.	.																										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	A	I	S	G	S	I	G	W	V	G	L	I	I	P	H	L	S	R	M	L	V	G	A	N	H	Q	S	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	C	T	M	L	V	G	A	T	Y	M	L	L	V	D	N	V	A	R	S	L	S	D	A	E	I	P	I	S	I	L	T	A	L	I	G	A
Template Known Secondary structure											S	S	T	T												S								.	.	.	.	.	.	.	.	.	.	.	.																				S		S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.													.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		309	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	L	A	V	L	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	F	G	V	L	V	Y	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions