 |
Job Description | P76147 | Confidence | 76.59% | Date | Thu Jan 5 12:19:41 GMT 2012 |
Rank | 30 | Aligned Residues | 97 |
% Identity | 10% | Template | d1vh8a_ |
SCOP info | Bacillus chorismate mutase-like
| IpsF-like
| IpsF-like
|
Resolution | 2.35 |
|
 |
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | H | E | C | G | D | K | V | L | S | V | F | A | R | H | I | Q | K | I | V | G | D | K | G | L | V | A | R | M | G | G | E | E | F | A | V | A | V | P | S | V | N | P | V | D | G | L | L | M | A | E | K | I | R | K | G | V | E | L | Q | P | F | T | W | Q | Q | K | T | L | Y | L | T | V | S | I | G | V | G | S | G |
Query Conservation |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|
|
|   |   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|   | . | . | . | . |
|
|
|   |
|
| . |
|   |   |   |
Template Sequence |   |
A | H | S | D | G | D | V | A | L | H | A | L | T | D | A | I | L | G | A | A | A | L | G | D | I | G | K | L | F | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | N | A | D | S | R | G | L | L | R | E | A | F | R | Q | V | Q | E | K | G | Y | K | I | G | . |
. |
. |
. |
N | V | D | I | T | I | . |
I | A | Q | A |
Template Known Secondary structure |   |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| G | G | G | S |
|
| . | . | . | . | . | . | . | . | . | . | . |
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | . | . | . | . |  |  |  |  |  |  | . |  |
| S |
|
Template Predicted Secondary structure |   |
 |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . | . | . |  |  |  |  |  |  | . |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
34 | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
. | . | 90 | . | . | . | |
. | . | . | . |
  |
  |   |
273 | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | A | S | Y | L | T | L | T | D | D | F | N | K | L | M | V | E | A | D | T | C | L | Y | R | S | K | K | D | G | R | N | R | T | S | T | M | R | Y | G | E | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
| . | . | . | . | . | . | . | . |
|
|   |
|   |   |   |   |
|   |   |   |
|
|   |   |
|   |
|   |   |   |   |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
P | . |
. |
. |
. |
. |
. |
. |
. |
K | X | R | P | H | I | D | A | X | R | A | K | I | A | E | D | L | Q | C | D | I | E | Q | V | N | V | K | A | T | T | T | E |
Template Known Secondary structure |   |
S | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| G | G | G |  |  |  |  |  |  |
|
| T |
Template Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
104 | |
|
|
|
|
|
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|