Job Description P76147 Confidence 99.89% Date Thu Jan 5 12:19:41 GMT 2012 Rank 13 Aligned Residues 177 % Identity 17% Template c3pjwA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 Resolution 3.10 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		S	V	A	A	I	N	S	L	M	K	Q	V	A	L	R	A	D	F	D	F	L	T	Q	V	Y	S	R	S	G	L	Y	E	A	L	K	S	P	S	L	K	Q	.	.	T	Q	H	L	T	V	M	L	L	D	I	D	Y	F	K	S	I	N	D	N	Y	G	H	E	C	G	D	K	V	L	S	V	F	A	R	H	I
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		L	F	Q	E	Q	A	E	R	S	E	K	L	R	T	E	S	Y	Q	D	N	L	T	G	L	A	N	R	R	Y	F	E	M	Q	L	N	A	R	V	S	N	P	E	Q	A	S	S	G	Y	L	L	L	L	R	V	K	D	L	A	G	L	N	Q	R	L	G	G	Q	R	T	D	E	L	L	K	A	V	G	E	Q	L
Template Known Secondary structure							T	T											B		T	T	T	S	S														T	T		T	T	T												S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		209	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		Q	K	I	V	.	.	.	.	G	D	K	G	L	V	A	R	M	G	G	E	E	F	A	V	A	V	P	S	V	N	P	V	D	G	L	L	M	A	E	K	I	R	K	G	V	E	L	Q	P	F	T	W	Q	Q	K	T	L	Y	L	T	V	S	I	G	V	G	S	G	R	A	S	Y	L	T	L	T	D	D	F	N
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																																								.																							.	.	.	.	.
Template Conservation																																																	.																							.	.	.	.	.
Template Sequence		S	R	E	C	A	K	Y	P	E	T	Q	N	L	V	T	R	I	R	G	G	E	F	A	V	L	A	P	G	M	T	R	E	E	A	L	Q	L	A	Q	S	L	D	S	A	L	S	S	.	L	Y	A	T	G	A	T	D	V	A	A	V	A	S	I	G	L	A	P	F	A	H	.	.	.	.	.	G	D	S	P	Q
Template Known Secondary structure						S	S		S	T	T	T	T							T	T								T																		T		.					T	S		S		T	T											T	.	.	.	.	.	T
Template Predicted Secondary structure																																																	.																							.	.	.	.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.						370	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	M	V	E	A	D	T	C	L	Y	R	S	K	K	D	G	R	N	R	T	S	T	M	R	Y	G	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	L	S	L	G	D	Q	A	L	A	Q	A	E	G	Q	G	E	Q	N	W	A	C	L	D	G	D	D	H
Template Known Secondary structure																S		S	S		S								S
Template Predicted Secondary structure
Template SS confidence
		375	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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