Job Description P76147 Confidence 9.09% Date Thu Jan 5 12:19:41 GMT 2012 Rank 73 Aligned Residues 121 % Identity 7% Template c3onqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:regulator of polyketide synthase expression; PDBTitle: crystal structure of regulator of polyketide synthase expression2 bad_0249 from bifidobacterium adolescentis Resolution 2.10 Å

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	E	A	L	K	S	P	S	L	K	Q	T	Q	H	L	T	V	M	L	L	D	I	D	Y	F	K	S	I	N	D	N	Y	G	H	E	C	G	D	K	V	L	S	V	F	A	R	H	I	Q	K	I	V	G	D	K	G	L	V	A	R	M	G	G	E	E	F	A	V	A	V	P	S	V	N	P	V	D	G	L
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		V	V	S	L	X	N	I	L	G	W	Q	G	D	F	N	C	F	A	I	G	G	V	P	S	.	.	.	.	.	.	.	.	.	.	.	A	S	L	A	S	T	S	L	A	I	R	K	A	V	R	D	L	G	G	.	E	H	V	V	I	G	T	Y	G	T	F	L	L	A	L	A	C	Q	X	G	A	V	T	P	E
Template Known Secondary structure										T			S	S										B	S	.	.	.	.	.	.	.	.	.	.	.	S																T	T		.									T	T										T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.												.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	A	E	K	I	R	K	G	V	E	L	Q	P	F	T	W	Q	Q	K	T	L	Y	L	T	V	S	I	G	V	G	S	G	R	A	S	Y	L	T	L	T	D	D	F	N	K	L	M	V	E	A	D	T	C	L	Y	R	S	K	K	D	G	R	N	R	T	S	T	M
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		V	T	C	T	A	V	X	P	A	F	S	E	D	E	.	.	.	.	.	.	.	.	.	.	.	.	P	L	Y	L	S	P	V	R	S	G	V	A	G	.	.	.	.	A	S	H	A	L	R	E	T	X	F	S	L	Q	A	A	P	A	L	S	T	P	S	R	P	L	R
Template Known Secondary structure								G	G	G	B		T	T	S	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.															G	G	G		S	S			S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.													120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions