Job Description P76147 Confidence 9.34% Date Thu Jan 5 12:19:41 GMT 2012 Rank 72 Aligned Residues 49 % Identity 20% Template c3iyuY_ PDB info PDB header:virus Chain: Y: PDB Molecule:outer capsid protein vp4; PDBTitle: atomic model of an infectious rotavirus particle Resolution 3.80 Å

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.			.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		T	Q	H	L	T	V	M	L	L	D	I	D	Y	F	K	S	I	N	D	N	Y	G	H	.	.	E	C	G	D	K	V	L	S	V	F	A	R	H	I	Q	K	I	V	G	D	K	G	L	V	A	R
Query Conservation																									.	.
Alig confidence																									.	.
Template Conservation
Template Sequence		D	S	P	V	I	S	A	I	I	D	F	K	T	L	K	N	L	N	D	N	Y	G	I	S	R	Q	Q	A	F	N	L	L	R	S	D	P	R	V	L	R	E	F	I	N	Q	D	N	P	I	I	R
Template Known Secondary structure		T	S			B			S	S											T	T													T											S	S		S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		714	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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