Return to main results Retrieve Phyre Job Id

Job DescriptionP76147
Confidence67.86%DateThu Jan 5 12:19:41 GMT 2012
Rank40Aligned Residues105
% Identity12%Templatec3f0gA_
PDB info PDB header:lyaseChain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase; PDBTitle: co-crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate2 synthase with cmp
Resolution2.08 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   193......200.........210.........220.........230.........240.........250.........260.........270..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  GHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSG
Query Conservation 

  

  
  

  
           
 




 

               
   
              
 




  
Alig confidence 























.....



































....





.



Template Conservation 











 





 



.....

  


 
   

  
  

          
  
 ....


 

.
   
Template Sequence  GHSDADVLLHAITDALFGAAALGD. . . . . IGRHFSDTDPRFKGADSRALLRECASRVAQAGFAIR. . . . NVDSTI. IAQA
Template Known Secondary structure  SSS


TT


.....S
SS
TTSTT

TT.....
SS
Template Predicted Secondary structure 





.....















.....

Template SS confidence 















































































   35....40.........50........ .60.........70.........80.........90.... .....100 ....
 
   273......280.........290.........300.........310.....
Predicted Secondary structure 

















Query SS confidence 










































Query Sequence  RASYLTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV
Query Conservation               

  

 


 

  


 
          
Alig confidence 
........

































Template Conservation 
........

 
    
   

  
      






 
 
Template Sequence  P. . . . . . . . KLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKL
Template Known Secondary structure  S........

GGGT

GGG

TT
Template Predicted Secondary structure 
........









Template SS confidence 










































   105 ....110.........120.........130.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions