Return to main results Retrieve Phyre Job Id

Job DescriptionP77302
Confidence98.49%DateThu Jan 5 12:27:30 GMT 2012
Rank60Aligned Residues100
% Identity13%Templated1otda_
SCOP infoProfilin-like PYP-like sensor domain (PAS domain) PYP-like
Resolution1.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   134.....140.........150.........160.........170.........180.........190..... ....200.........210.
Predicted Secondary structure 



































..







Query SS confidence 





























































. .















Query Sequence  FFLTNSAPMLLIDPSRDGQIVDANLAALNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISH. . LPGGHKPLNFVHKLAD
Query Conservation                   
 
   
 
     
                              ..                
Alig confidence 











.
















































..















Template Conservation 
 

  
 

  . 
  


   
 
   
 
    
  
      
 
                 
             
Template Sequence  SQLDNLAFGAIQ. LDGDGTILQYNAAEGDITGRNPKEVIGKNFFKDVAPCTDSPEFSGKFKEGVASGNLNTMFEYTFDYQ
Template Known Secondary structure 

STT
SS.
TT
B



TTSB





GGG
STTTT


SS
Template Predicted Secondary structure 




.






















Template SS confidence 















































































   21........30.. .......40.........50.........60.........70.........80.........90.........
 
   212.......220.........230....
Predicted Secondary structure 
















Query SS confidence 






















Query Sequence  GSTRHVQTYAGPIEIYGDKLMLC
Query Conservation 
    
                 
Alig confidence 






















Template Conservation 
    
 
            
 
Template Sequence  MTPTKVKVHMKKALSGDSYWVFV
Template Known Secondary structure  S


SSSS
Template Predicted Secondary structure 






Template SS confidence 






















   100.........110.........120..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions