Job Description P77302 Confidence 99.71% Date Thu Jan 5 12:27:30 GMT 2012 Rank 15 Aligned Residues 180 % Identity 14% Template c3p7nB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:sensor histidine kinase; PDBTitle: crystal structure of light activated transcription factor el222 from2 erythrobacter litoralis Resolution 2.10 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.																																			.
Query SS confidence																					.	.																																			.
Query Sequence		Y	A	R	F	F	L	T	N	S	A	P	M	L	L	I	D	P	S	R	.	.	D	G	Q	I	V	D	A	N	L	A	A	L	N	F	Y	G	Y	N	H	E	T	M	C	Q	K	H	T	W	E	I	N	M	L	G	.	R	R	V	M	P	I	M	H	E	I	S	H	L	P	G	G	H	K	P	L	N	F	V	H
Query Conservation																					.	.																																			.
Alig confidence																					.	.																																			.
Template Conservation
Template Sequence		W	V	L	D	L	I	E	A	S	P	I	A	S	V	V	S	D	P	R	L	A	D	N	P	L	I	A	I	N	Q	A	F	T	D	L	T	G	Y	S	E	E	E	C	V	G	R	N	C	R	F	L	A	G	S	G	T	E	P	W	L	T	D	K	I	R	Q	G	V	R	E	H	K	P	V	L	V	E	I	L	N
Template Known Secondary structure									T		S	S							T	T	S	T	T																						T	T	S		G	G	G	G	B		T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																										.	.	.	.	.
Query SS confidence																										.	.	.	.	.
Query Sequence		K	L	A	D	G	S	T	R	H	V	Q	T	Y	A	G	P	I	E	I	Y	G	D	K	L	.	.	.	.	.	M	L	C	I	V	H	D	I	T	E	Q	K	R	L	E	E	Q	L	E	H	A	A	H	H	D	A	M	T	G	L	L	N	R	R	Q	F	Y	H	I	T	E	P	G	Q	M	Q	H	L	A	I	A
Query Conservation																										.	.	.	.	.
Alig confidence																										.	.	.	.	.
Template Conservation
Template Sequence		Y	K	K	D	G	T	P	F	R	N	A	V	L	V	A	P	I	Y	D	D	D	D	E	L	L	Y	F	L	G	S	Q	V	E	V	G	M	A	R	R	E	R	A	A	E	M	L	K	T	L	S	P	R	Q	L	E	V	T	T	L	V	A	S	G	L	R	N	K	E	V	A	A	R	L	G	L	S	E	K	T	V
Template Known Secondary structure				T	T	S															T	T	T	T																								T	T	S													T	T											T
Template Predicted Secondary structure
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	Y	S	L	L	L	I	D	T	D	R	F	K	H	I	N	D	L	Y	G	H	S	K	G	D	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	M	H	R	G	L	V	M	E	K	L	N	L	K	T	S	A	D	L	V	R	I	A	V	E	A	G	I
Template Known Secondary structure												T	T			S											T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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