Job Description P77302 Confidence 99.25% Date Thu Jan 5 12:27:30 GMT 2012 Rank 24 Aligned Residues 110 % Identity 13% Template c3mfxA_ PDB info PDB header:transcription Chain: A: PDB Molecule:sensory box/ggdef family protein; PDBTitle: crystal structure of the sensory box domain of the sensory-2 box/ggdef protein so_1695 from shewanella oneidensis,3 northeast structural genomics consortium target sor288b Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	Q	G	F	Y	A	R	F	F	L	T	N	S	A	P	M	L	L	I	D	P	S	R	D	G	Q	I	V	D	A	N	L	A	A	L	N	F	Y	G	Y	N	H	E	T	M	C	Q	K	H	T	W	E	I	N	M	L	G	R	R	V	M	P	I	M	H	E	I	S	H	L	P	G	G	H	K	P	L	N	F
Query Conservation
Alig confidence																						.																																	.	.
Template Conservation																						.																																	.	.
Template Sequence		H	S	S	L	E	T	I	E	L	F	I	Q	H	L	T	E	A	X	I	L	.	V	N	A	N	G	F	I	R	S	C	N	Q	R	S	A	E	L	L	D	C	P	Q	V	S	L	K	G	Q	D	W	R	N	.	.	F	L	T	E	H	H	Q	A	R	Y	D	N	L	L	S	Q	P	V	Q	H	P	A	Q	E	T
Template Known Secondary structure													T	T		S	S					.			T	T	S	B												T	T	S						T	T	S	B	G	G	G	.	.	G	B		T	T			G	G	G	G		T	T				S
Template Predicted Secondary structure																						.																																	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	H	K	L	A	D	G	S	T	R	H	V	Q	T	Y	A	G	P	I	E	I	Y	G	D	K	L	M	L	C	I	V	H	D	I
Query Conservation
Alig confidence																					.
Template Conservation																					.
Template Sequence		T	L	I	C	A	S	G	K	A	K	D	V	E	L	S	I	S	Y	I	.	P	G	H	E	P	X	F	V	X	V	X	H	D	L
Template Known Secondary structure						T	T	S													.		S	S	S
Template Predicted Secondary structure																					.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions