Job Description P77302 Confidence 99.19% Date Thu Jan 5 12:27:30 GMT 2012 Rank 30 Aligned Residues 213 % Identity 13% Template c3ewkA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:sensor protein; PDBTitle: structure of the redox sensor domain of methylococcus capsulatus2 (bath) mmos Resolution 2.34 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence		V	W	I	V	S	P	F	E	E	Q	L	I	Y	A	N	S	A	A	K	L	L	M	Q	D	L	T	F	S	Q	L	R	T	G	P	.	.	.	.	Y	S	V	S	S	Q	K	E	L	P	K	Y	L	S	D	L	Q	N	Q	H	D	I	I	E	I	L	T	V	Q	R	K	E	E	E	T	A	L	S	C	R	L	V
Query Conservation																																				.	.	.	.
Alig confidence									.																											.	.	.	.
Template Conservation									.
Template Sequence		V	S	I	T	D	L	Q	.	G	R	I	L	Y	A	N	D	N	F	C	A	V	S	R	Y	G	R	E	E	L	V	G	Q	D	H	R	I	V	N	S	G	Y	H	G	K	A	Y	I	R	D	M	W	R	T	I	S	R	G	N	I	W	Q	G	E	F	C	N	R	R	K	D	G	T	R	Y	W	V	D	S	T	I
Template Known Secondary structure							T	T	.		B												T	T							T	T	S	B	G	G	G	G			S		S													T	T	T												S	S	S
Template Predicted Secondary structure									.
Template SS confidence
		100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	K	L	T	E	T	E	P	V	I	I	F	E	G	I	E	A	P	A	T	L	G	L	K	A	S	R	S	A	N	Y	Q	R	K	K	Q	G	F	Y	A	R	F	F	L	T	N	S	A	P	M	L	L	I	D	P	S	R	D	G	Q	I	V	D	A	N	L	A	A	L	N	F	Y	G	Y	N	H	E	T	M
Query Conservation
Alig confidence												.	.	.	.																													.	.	.	.	.
Template Conservation												.	.	.	.																													.	.	.	.	.
Template Sequence		V	P	L	M	D	N	A	G	K	P	.	.	.	.	R	Q	Y	I	S	I	R	R	D	I	T	A	Q	K	E	A	E	A	Q	L	A	R	L	K	Q	A	M	D	.	.	.	.	.	A	N	S	E	M	I	L	L	T	D	R	A	G	R	I	I	Y	A	N	P	A	L	C	R	F	S	G	M	A	E	G	E	L
Template Known Secondary structure							S	S	S			.	.	.	.											T	T	T	T															.	.	.	.	.	T			S							T	T	S														T			T
Template Predicted Secondary structure												.	.	.	.																													.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.							210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.
Predicted Secondary structure														.																											.	.	.	.	.	.																							.	.
Query SS confidence														.																											.	.	.	.	.	.																							.	.
Query Sequence		C	Q	K	H	T	W	E	I	N	M	L	G	.	R	R	V	M	P	I	M	H	E	I	S	H	L	P	G	G	H	K	P	L	N	F	V	H	K	L	.	.	.	.	.	.	A	D	G	S	T	R	H	V	Q	T	Y	A	G	P	I	E	I	Y	G	D	K	L	.	.	M	L	C	I	V	H	D
Query Conservation														.																											.	.	.	.	.	.																							.	.
Alig confidence														.																											.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		L	G	Q	S	P	S	I	L	D	S	P	L	A	D	Q	E	T	L	A	A	M	Q	E	A	L	Q	A	G	Q	P	W	S	G	R	L	L	N	R	R	R	T	G	P	A	P	H	D	A	E	D	Y	W	A	E	I	S	T	T	P	I	H	T	D	G	N	G	L	V	G	Y	V	Q	I	Q	H	D
Template Known Secondary structure			S	S		G	G	G	G	B		T	T	S															T															S	S	S	S																	S	S	S
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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