Job Description P77302 Confidence 98.09% Date Thu Jan 5 12:27:30 GMT 2012 Rank 73 Aligned Residues 147 % Identity 7% Template c2oolA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the chromophore-binding domain of an unusual2 bacteriophytochrome rpbphp3 from r. palustris Resolution 2.20 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	P	M	L	L	I	D	P	S	R	D	G	Q	I	V	D	A	N	L	A	A	L	N	F	Y	G	Y	N	H	E	T	M	C	Q	K	H	T	W	E	I	N	M	L	G	R	R	V	M	P	I	M	H	E	I	S	H	L	P	G	G	H	K	P	L	N	F	V	H	K	L	A	D	G	S	T	R	H	V	Q
Query Conservation
Alig confidence																																															.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		P	H	G	Y	L	F	V	V	S	E	T	D	L	R	I	A	S	V	S	A	N	V	E	D	L	L	R	Q	P	P	A	S	L	L	N	V	P	I	A	H	Y	L	T	A	A	.	.	.	.	S	A	A	R	L	T	H	A	L	H	G	A	I	N	P	I	R	L	D	V	V	T	P	D	G	E	R	A	F	N	G
Template Known Secondary structure		T	T	S							T	T	T		B						T	T						S	S		G	G	G	G	T	T		B	G	G	G	G	B				.	.	.	.															S								T	T
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	A	G	P	I	E	I	Y	G	D	K	L	M	L	C	I	V	H	D	I	T	E	Q	K	R	L	E	E	Q	L	E	H	A	A	H	H	D	A	M	T	G	L	L	N	R	R	Q	F	Y	H	I	T	E	P	G	Q	M	Q	H	L	A	I	A	Q	D	Y	S	L	L	L	I	D	T	D	R
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		I	L	H	R	H	D	S	.	.	.	.	.	I	V	I	L	E	L	E	P	R	D	E	S	R	Y	T	N	E	F	F	R	S	V	R	V	A	I	R	R	L	Q	T	A	A	D	L	P	T	A	C	W	I	A	A	S	E	V	R	R	I	T	G	F	D	R	I	K	V	Y	Q	F	A	A	D	W
Template Known Secondary structure							T	T	.	.	.	.	.													S																		T			S																			S									T	T	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions