Job Description P39389 Confidence 100.00% Date Thu Jan 5 12:00:20 GMT 2012 Rank 56 Aligned Residues 363 % Identity 14% Template d7aata_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.90

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																														.	.	.
Query SS confidence																														.	.	.
Query Sequence		V	E	I	T	Q	W	D	Q	V	L	D	M	L	E	A	H	S	D	S	S	I	V	P	L	S	K	S	T	.	.	.	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S
Query Conservation																														.	.	.
Alig confidence																														.	.	.																						.	.
Template Conservation																																																						.	.
Template Sequence		G	P	P	D	P	I	L	G	V	T	E	A	F	K	R	D	T	N	S	K	K	M	N	L	G	V	G	A	Y	R	D	D	N	G	K	P	Y	V	L	N	C	V	R	K	A	E	A	M	I	A	A	K	.	.	K	M	D	K	E	Y	L	P	I	A	G	L	A	D	F	T	R	A	S	A	E	L	A	L	G	E
Template Known Secondary structure																				T	T								S				T	T	S																		T	.	.	T								T	T																T
Template Predicted Secondary structure																																																						.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
			163	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.
Predicted Secondary structure		.										.	.														.	.	.																																											.	.
Query SS confidence		.										.	.														.	.	.																																											.	.
Query Sequence		.	G	S	V	V	T	A	D	D	I	.	.	I	I	T	S	G	C	H	N	S	M	S	L	A	.	.	.	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	.	.	I	S	V	E	A	L	E	L
Query Conservation		.										.	.														.	.	.																																											.	.
Alig confidence		.										.	.														.	.	.																																											.	.
Template Conservation
Template Sequence		N	S	E	A	F	K	S	G	R	Y	V	T	V	Q	G	I	S	G	T	G	S	L	R	V	G	A	N	F	L	Q	R	F	F	K	F	S	R	D	V	Y	L	P	K	P	S	W	G	N	H	T	P	I	F	R	D	A	G	L	Q	L	Q	A	Y	R	Y	Y	D	P	K	T	C	S	L	D	F	T	G	A	M	E
Template Known Secondary structure		T						T	T																										T	T									S			T	T								T	T											T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		235	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290				.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure						.																																																					.	.	.
Query SS confidence						.																																																					.	.	.
Query Sequence		A	L	E	Q	.	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	.	.	.	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S
Query Conservation						.																																																					.	.	.
Alig confidence						.																																																					.	.	.
Template Conservation
Template Sequence		D	I	S	K	I	P	E	K	S	I	I	L	L	H	A	C	A	H	N	P	T	G	V	D	P	R	Q	E	Q	W	K	E	L	A	S	V	V	K	K	R	N	L	L	A	Y	F	D	M	A	Y	Q	G	F	A	S	G	D	I	N	R	D	A	W	A	L	R	H	F	I	E	Q	G	I	D	V	V	L	S	Q	S
Template Known Secondary structure				T	T	S		T	T							S	S	S		T	T	T																			T	T								S		T	T	T	T	T	S						T									T	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		311	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.									.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure								.												.	.	.	.	.	.	.	.																																.	.	.	.
Query SS confidence								.												.	.	.	.	.	.	.	.																																.	.	.	.
Query Sequence		F	S	K	S	I	A	.	P	G	L	R	V	G	W	V	A	P	G	.	.	.	.	.	.	.	.	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	.	.	.	.	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A
Query Conservation								.												.	.	.	.	.	.	.	.																																.	.	.	.
Alig confidence								.												.	.	.	.	.	.	.	.																																.	.	.	.
Template Conservation
Template Sequence		Y	A	K	N	M	G	L	Y	G	E	R	A	G	A	F	T	V	I	C	R	D	A	E	E	A	K	R	V	E	S	Q	L	K	I	L	I	R	P	M	Y	S	N	P	P	M	N	G	A	R	I	A	S	L	I	L	N	T	P	E	L	R	K	E	W	L	V	E	V	K	G	M	A	D	R	I	I	S	M	R	T
Template Known Secondary structure			T	T	T	S			G	G	G										S	S																				S	S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		378	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	Y	T	C	W	I	R	E	Y	F	P	C	E	.	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E
Query Conservation															.
Alig confidence															.																	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	V	S	N	L	K	K	E	G	S	S	H	N	W	Q	H	I	T	D	Q	I	G	M	F	C	F	T	G	L	.	.	.	.	K	P	E	Q	V	E	R	L	T	K	E	F	S	I	Y	M	T	K	D	G	.	.	.	.	.	.	.	.	.	.	.	.	R	I	S	V	A	G	V	A	S	S	N	V	G	Y
Template Known Secondary structure										T	T			S										S	S							.	.	.	.																		T	T		.	.	.	.	.	.	.	.	.	.	.	.				G	G	G			T	T	T
Template Predicted Secondary structure																																.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.													.	.	.	.	390	.	.	.	.	.	.	.	.	.
		457	.	.	460	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	Q	I	G	E	A	V	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	H	A	I	H	Q	V	T	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions