Job Description P39389 Confidence 99.91% Date Thu Jan 5 12:00:20 GMT 2012 Rank 137 Aligned Residues 326 % Identity 10% Template d2cfba1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.85

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	.	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S
Query Conservation																	.
Alig confidence																	.																	.	.	.																								.	.	.	.	.	.
Template Conservation																																		.	.	.																								.	.	.	.	.	.
Template Sequence		N	Q	Y	I	D	Y	V	G	S	W	G	P	A	I	V	G	H	A	H	P	E	V	I	D	A	L	H	A	A	L	E	K	.	.	.	G	T	S	F	G	A	P	C	L	L	E	N	I	L	A	E	M	V	I	A	A	V	P	.	.	.	.	.	.	S	V	E	M	V	R	F	V	N	S	G	T	E	A	C	M
Template Known Secondary structure							S	S	T	T	T	T	T		T	T		B	T													T	T	.	.	.		S			S	S																	S	.	.	.	.	.	.	S		S						S	S
Template Predicted Secondary structure																																		.	.	.																								.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		183	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																																																	.	.
Query SS confidence									.	.																																																	.	.
Query Sequence		L	A	L	M	A	V	C	.	.	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	.	.	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M
Query Conservation									.	.																																																	.	.
Alig confidence									.	.															.	.	.	.	.	.	.	.												.	.	.	.	.											.	.
Template Conservation																									.	.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		A	V	L	R	L	M	R	A	Y	T	Q	R	E	K	V	I	K	F	E	G	C	Y	H	.	.	.	.	.	.	.	.	G	H	A	A	T	L	T	A	P	Y	N	.	.	.	.	.	D	L	E	A	V	S	R	L	F	E	Q	Y	P	N	D	I	A	G	V	I	L	E	P	V	V	G	N	A	G	F	I	P	P
Template Known Secondary structure												T									T				.	.	.	.	.	.	.	.										T	T	.	.	.	.	.												S	T	T	T								S	S	B		S	S	S		B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.									130	.	.	.	.	.	.	.	.	.	140						.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K
Query Conservation																																																												.
Alig confidence																																		.	.	.	.	.																						.
Template Conservation																																		.	.	.	.	.
Template Sequence		D	A	G	F	L	E	G	L	R	E	L	T	K	Q	Y	G	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	.	.	.	.	.	G	G	A	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	V	I	G	G	G	L	P	V	G	A	Y	G	G	R	A	E	I	M	K	M	V	A	P	A	G
Template Known Secondary structure			T	T												T	T								T	T	T	T	T	T	T		T	.	.	.	.	.	T							T				S						G	G	G	G	T	T	S													T	T	S		T	T
Template Predicted Secondary structure																																		.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390											.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	.	.	.	.	.	.	.	.	.	.	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																				.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	P	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	I	L	S	R	P	G	S	Y	E	H	L	D	R	I	T	G	K	L	V	Q	G	L	L	D	A	A	R	E	F	G	H	E	V	C	G	G	H	I	S	G	M	F	G	L	F	F	T	A	G	P	V	T	N	Y	E	Q	A	K	Q	S
Template Known Secondary structure		.	.																					T	S	T	T																						T	T	T									T	T						S	S	S				S	S					T	T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.							.
Template Conservation																											.	.	.	.	.	.	.	.							.
Template Sequence		D	L	K	K	F	A	A	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	E	.	.	.	.	.	.	.	.	A	G	F	T	S	L	.	A	H	T	E	A	D	I	E	R	T	I	A	A	A	R	T	V	L	S	Q
Template Known Secondary structure																T	T					S	S	T	T	S	.	.	.	.	.	.	.	.						T	.	T																		T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.							.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.									.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions