Job Description P39389 Confidence 99.91% Date Thu Jan 5 12:00:20 GMT 2012 Rank 138 Aligned Residues 324 % Identity 11% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.								.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																								.	.
Query SS confidence																																					.	.	.	.	.	.	.																								.	.
Query Sequence		T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	.	.	.	.	.	.	.	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	.	.	I	I	I	T	S	G	C	H	N	S	M	S	L
Query Conservation																																					.	.	.	.	.	.	.																								.	.
Alig confidence																																					.	.	.	.	.	.	.														.	.	.	.	.						.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		N	A	G	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	.	.	.	.	.	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S	T	Q	F	A	M
Template Known Secondary structure			S	S	S														T	S	S	S	S	T	T	S	S	S		G	G	G	S		T	T	S																		T	T	.	.	.	.	.			S	S							S	S
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	.	.	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A
Query Conservation																							.	.
Alig confidence																							.	.																																												.												.	.
Template Conservation																																																																				.												.	.
Template Sequence		I	P	M	N	F	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	.	S	N	E	T	I	E	G	A	Q	F	K	.	.
Template Known Secondary structure									T	T									S														S									G	G	G	T	T		S				G	G	G					T	T								.	S			T	T	T	T				S	.	.
Template Predicted Secondary structure																																																																				.												.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																			.	.	.	.												.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																			.	.	.	.												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	.	.	.	.	L	S	R	P	F	D	L	N	Q	F	G	.	.	.	.	.	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	V	T	V	V	I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M	L
Template Known Secondary structure		.	.	.	.	.	.	S					T	T	S							T	T	T	T	.	.	.	.	T	S	S				G	G	G		S	.	.	.	.	.						T	T	T	T	T			S	S								G	G	G	S	S	S			T	T	S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.																			.	.	.	.												.	.	.	.	.
Template SS confidence
								161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.						190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
				332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.					.	400	.	.	.	.	.
Predicted Secondary structure		.	.																																																																				.	.	.	.
Query SS confidence		.	.																																																																				.	.	.	.
Query Sequence		.	.	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	.	.	.	.	G	F	L	L	W	I	E
Query Conservation		.	.																																																																				.	.	.	.
Alig confidence		.	.																																																								.	.											.	.	.	.
Template Conservation																																																											.	.
Template Sequence		R	Y	D	T	Y	V	K	N	N	S	L	Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	A	I	D	Q	S	.	.	G	G	F	Y	R	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R
Template Known Secondary structure									T	T	T		S	S																				T	T																						T	S	.	.	T	T	S	S			S	S		G	G	G	B		S	S
Template Predicted Secondary structure																																																											.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation																																												.
Alig confidence																													.	.	.	.	.	.										.
Template Conservation																													.	.	.	.	.	.
Template Sequence		L	A	S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	.	.	.	.	.	.	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F	K	R	S
Template Known Secondary structure			S															T	T			S		B			T	T	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330							.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions