Job Description P39389 Confidence 99.92% Date Thu Jan 5 12:00:20 GMT 2012 Rank 128 Aligned Residues 334 % Identity 10% Template d2bkwa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.57

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.				190	.	.	.	.
Predicted Secondary structure																																																																										.	.	.
Query SS confidence																																																																										.	.	.
Query Sequence		A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	.	.	.	K	P	G	D	I
Query Conservation																																																																										.	.	.
Alig confidence																																													.	.	.	.	.																									.	.	.
Template Conservation																																													.	.	.	.	.
Template Sequence		I	I	L	S	G	A	V	Q	K	A	L	D	V	P	S	L	G	H	T	S	P	E	F	V	S	I	F	Q	R	V	L	K	N	T	R	A	V	F	K	S	A	A	A	.	.	.	.	.	S	K	S	Q	P	F	V	L	A	G	S	G	T	L	G	W	D	I	F	A	S	N	F	I	L	S	K	A	P	N	K	N
Template Known Secondary structure											T	T	S						T	T	S																		T	T			G	G	.	.	.	.	.	G	T								S		T	T											S		T	T		S
Template Predicted Secondary structure																																													.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.			.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure												.	.																							.
Query SS confidence												.	.																							.
Query Sequence		V	A	V	E	S	P	C	Y	Y	G	.	.	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	.	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q
Query Conservation												.	.																							.
Alig confidence												.	.																							.																						.																					.
Template Conservation																																																										.																					.
Template Sequence		V	L	V	V	S	T	G	T	F	S	D	R	F	A	D	C	L	R	S	Y	G	A	Q	V	D	V	V	R	P	L	K	I	G	E	S	V	P	L	E	L	I	T	E	K	L	S	Q	N	S	Y	G	A	V	T	V	T	.	H	V	D	T	S	T	A	V	L	S	D	L	K	A	I	S	Q	A	I	K	.	Q	T
Template Known Secondary structure							S	S													T	T									S	S	T	T	S														S			S						.	S			T	T	T	T														.
Template Predicted Secondary structure																																																										.																					.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		S	P	E	T	F	F	V	V	D	A	V	C	S	I	G	C	E	E	F	E	.	.	.	.	.	.	.	F	D	E	W	G	V	D	F	A	L	T	A	S	Q	A	I	G	A	P	A	G	L	S	I	S	L	C	S	S	R	F	X	D	Y	A	L	N	D	S	K	N	G	H	V	H	G	Y	F	S	S	L	R	R
Template Known Secondary structure			T	T	S							T	T	T	T	T	T	S				.	.	.	.	.	.	.	T	T	T	T	T		S													S																T									S		S	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
															339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																			.
Template Sequence		W	T	P	I	X	E	N	Y	E	A	G	K	G	A	Y	F	A	T	P	P	V	Q	L	I	N	S	L	D	V	A	L	K	E	.	I	L	E	E	G	L	H	K	R	W	D	L	H	R	E	X	S	D	W	F	K	D	S	L	V	N	G	L	Q	L	T	S	V	S	R	Y	P	S	N	X	S	A	H	G	L	T
Template Known Secondary structure											T	T					S	S																	.																										T	T	T					S	S		S	S	S	T	T	B		S	S
Template Predicted Secondary structure																																			.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	.	.	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M	E
Query Conservation																																											.	.
Alig confidence																													.	.	.												.	.																.
Template Conservation																													.	.	.																													.
Template Sequence		A	V	Y	V	A	D	P	P	D	V	I	A	F	L	K	S	H	G	V	V	I	A	G	G	I	H	K	.	.	.	D	I	G	P	K	Y	I	R	I	G	H	X	G	V	T	A	C	N	K	N	L	P	Y	X	K	N	C	F	.	D	L	I	K	L	A	L	Q
Template Known Secondary structure						S												T	T				B					T	.	.	.	T	T	G	G	G								G	G	G	T	S	S	T	T		T							.							T	T
Template Predicted Secondary structure																													.	.	.																													.
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.		.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions