Phyre 2 alignment of P39389 with d2aeua1

Job Description P39389
Confidence 100.00% Date Thu Jan 5 12:00:20 GMT 2012

Rank 81 Aligned Residues 347

% Identity 13% Template d2aeua1

SCOP info PLP-dependent transferase-like PLP-dependent transferases SelA-like

Resolution 1.70

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence	W	D	Q	V	L	D	M	L	E	A	H	S	D	S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D
Query Conservation
Alig confidence																											.	.														.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																											.	.														.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Sequence	R	K	I	I	L	E	I	L	N	E	K	G	R	D	A	L	Y	D	L	S	G	L	S	G	G	F	.	.	L	I	D	E	K	D	K	A	L	L	N	T	Y	.	.	.	.	.	.	.	.	.	.	I	G	S	S	Y	F	A	E	K	V	N	E	Y	G	L	K	H	L	G	G	.	.	.	.	D	E	N	D	K
Template Known Secondary structure											T		G	G	G					S	S						.	.											T	S	T	.	.	.	.	.	.	.	.	.	.	T																		T		.	.	.	.		T	T
Template Predicted Secondary structure																											.	.														.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template SS confidence
	15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.											.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.					.	.	.	.	.

	171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	D	I	.	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N
Query Conservation																									.
Alig confidence																									.																										.	.	.	.	.	.	.	.	.	.																			.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.																			.
Template Sequence	C	V	G	F	N	R	T	S	S	A	I	L	A	T	I	L	A	L	K	P	K	K	V	I	H	Y	L	P	E	L	P	G	H	P	S	I	E	R	S	C	K	I	V	N	A	K	Y	F	E	S	.	.	.	.	.	.	.	.	.	.	D	K	V	G	E	I	L	N	K	I	D	K	D	T	L	V	I	I	.	T
Template Known Secondary structure					S	S															S							S	S	S	S			T									T	T							.	.	.	.	.	.	.	.	.	.	S							T	T			T	T						.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
	79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.											.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.

	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y
Query Conservation
Alig confidence																																																						.	.	.
Template Conservation																																																						.	.	.
Template Sequence	G	S	T	M	D	L	K	V	I	E	L	E	N	F	K	K	V	I	N	T	A	K	N	K	E	A	I	V	F	V	D	D	A	S	G	A	R	V	R	L	L	F	N	Q	P	P	A	L	K	L	G	A	D	.	.	.	L	V	V	T	S	T	D	K	L	M	E	G	P	R	G	G	L	L	A	G	K	K	E	L
Template Known Secondary structure		B		T	T	S		B																	T								T	T								T	T								T		S	.	.	.						T	T	S	S	S	S	S		S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
	148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.						.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	.	.	.	.	.	C	E	I	C	I	T	R	P	K	G	G	F	L	L	W	I
Query Conservation																																																												.	.	.	.	.
Alig confidence																																																												.	.	.	.	.
Template Conservation
Template Sequence	V	D	K	I	Y	I	E	G	T	K	F	G	L	E	A	Q	P	P	L	L	A	G	I	Y	R	A	L	K	N	F	N	L	E	R	I	R	K	A	F	E	R	A	K	N	F	D	L	S	K	I	E	K	L	N	K	E	L	K	A	I	D	D	N	I	N	I	V	Y	E	R	T	P	T	G	F	V	I	K	R	V
Template Known Secondary structure										T	T	T		B																																												T	T	T		T	T									S	S
Template Predicted Secondary structure
Template SS confidence
	225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.

	405	.	.	.				.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.			.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure					.	.	.															.																															.	.
Query SS confidence					.	.	.															.																															.	.
Query Sequence	E	L	P	E	.	.	.	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	.	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	.	.	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M	E
Query Conservation					.	.	.															.																															.	.
Alig confidence					.	.	.															.											.	.	.																		.	.
Template Conservation																																	.	.	.
Template Sequence	Y	K	D	D	T	I	N	I	K	K	L	I	E	I	G	F	N	L	L	K	N	Y	G	I	I	T	I	T	V	A	G	M	.	.	.	P	G	A	S	K	S	L	R	I	D	L	T	S	R	D	A	E	R	I	D	D	N	Y	I	I	K	A	I	V	E	S	I	K	M	A	F	K
Template Known Secondary structure		S	S																								S	T	T	S	S	S	.	.	.		S	S			S					T	T	S	G	G	G	G	G	S																	T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
	305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.				.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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