Job Description P39389 Confidence 99.90% Date Thu Jan 5 12:00:20 GMT 2012 Rank 154 Aligned Residues 349 % Identity 14% Template d1y4ia1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.90

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		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	V	E	I	T	Q	W	D	Q	V	L	D	M	L	E	A	H	S	D	S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		S	D	C	R	T	Y	G	F	N	T	Q	I	V	H	A	G	Q	Q	P	D	P	S	T	G	A	L	S	T	P	I	F	Q	T	S	T	F	V	F	D	S	A	E	Q	G	A	A	R	F	A	L	E	E	S	G	Y	I	Y	T	R	L	G	N	P	T	T	D	A	L	E	K	K	L	A	V	L	E	R	.	.	.
Template Known Secondary structure				G	G	G	S									T	T					T	T	T			S	S							S					S	S										S		S	S	S	S				T	T	S																T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.					.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.
Query SS confidence																																														.	.	.	.
Query Sequence		S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	.	.	.	.	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W
Query Conservation																																														.	.	.	.
Alig confidence		.	.	.	.																																									.	.	.	.																.	.	.	.	.
Template Conservation		.	.	.	.																																																												.	.	.	.	.
Template Sequence		.	.	.	.	G	E	A	G	L	A	T	A	S	G	I	S	A	I	T	T	T	L	L	T	L	C	Q	Q	G	D	H	I	V	S	A	S	A	I	Y	G	C	T	H	A	F	L	S	H	S	M	P	K	F	G	I	N	V	R	F	V	D	A	G	.	.	.	.	.	K	P	E	E	I	R	A	A	M	R	P	E
Template Known Secondary structure		.	.	.	.		S						S	S															T	T							S	S	S										T					T	T								T	T	.	.	.	.	.	S										T	T
Template Predicted Secondary structure		.	.	.	.																																																												.	.	.	.	.
Template SS confidence
						79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.	P	G
Query Conservation																																																																															.
Alig confidence												.	.									.	.	.																						.	.	.	.	.	.	.	.																										.
Template Conservation												.	.									.	.	.																						.	.	.	.	.	.	.	.
Template Sequence		T	K	V	V	Y	I	E	T	P	A	.	.	N	P	T	L	S	L	V	D	.	.	.	I	E	T	V	A	G	I	A	H	Q	Q	G	A	L	L	V	V	D	N	T	F	.	.	.	.	.	.	.	.	M	S	P	Y	C	Q	Q	P	L	Q	L	G	A	D	I	V	V	H	S	V	T	Y	I	N	G	H	G	D
Template Known Secondary structure									S	S		.	.	T	T	T						.	.	.											T	T								T	T	.	.	.	.	.	.	.	.	T		T	T	T			G	G	G	G	T		S										S		S	S
Template Predicted Secondary structure												.	.									.	.	.																						.	.	.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.									.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		L	R	V	G	W	V	A	P	G	R	.	.	.	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R
Query Conservation												.	.	.
Alig confidence												.	.	.																															.	.	.	.	.	.																							.	.
Template Conservation																																													.	.	.	.	.	.																							.	.
Template Sequence		V	I	G	G	I	I	V	G	K	Q	E	F	I	D	Q	A	R	F	V	G	L	K	D	I	T	G	G	C	M	S	P	F	N	A	W	L	T	L	R	G	V	K	T	.	.	.	.	.	.	L	G	I	R	M	E	R	H	C	E	N	A	L	K	I	A	R	F	L	E	G	H	.	.	P	S	I	T	R	V	Y
Template Known Secondary structure																				T					T	T																	T	T	.	.	.	.	.	.																					T		.	.	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.																							.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.
		396	.	.																		.	400	.	.	.	.	.	.	.		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.																				.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	F	L	L	W	I	E	L	P	.	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	G	K	Y
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	G	L	S	S	H	P	Q	Y	E	L	G	Q	R	Q	M	S	L	P	G	G	I	I	S	F	E	I	A	G	G	L	E	A	G	R	R	M	I	N	S	V	E	L	C	L	L	A	V	S	L	G	D	T	E	T	L	I	Q	H	P	A	S	M	T	H	S	P	V	A	P	E	E	R	L	K	A	G	I	T
Template Known Secondary structure			T	T	S	T	T		T	T									S	S			S							T	T											T		S	S	S				S			S		S	S						T	T	T	T	T	T	S	S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A
Query Conservation
Alig confidence																		.	.	.
Template Conservation																		.	.	.
Template Sequence		D	G	L	I	R	L	S	V	G	L	E	D	P	E	D	I	.	.	.	I	N	D	L	E	H	A	I	R	K	A
Template Known Secondary structure		T	T								S	S						.	.	.
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.				.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions