Return to main results Retrieve Phyre Job Id

Job DescriptionP39389
Confidence99.76%DateThu Jan 5 12:00:20 GMT 2012
Rank210Aligned Residues84
% Identity23%Templated1v4ra1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain GntR-like transcriptional regulators
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  TRYQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMKLITPQPRSGYFVAQRKAQPPVPPMTRP
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Template Sequence  KGYADVATHFRTLIKSGELAPGDTLPSVADIRAQFGVAAKTVSRALAVLKSEGLVSSRGALGTVVEKNPIVITGADRLKR
Template Known Secondary structure 

TTTTS

TTSB


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   910.........20.........30.........40.........50.........60.........70.........80........
 
   82...
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Query Sequence  VQRP
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Template Sequence  MEKN
Template Known Secondary structure  TTS
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   8990..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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