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Job DescriptionP39389
Confidence99.59%DateThu Jan 5 12:00:20 GMT 2012
Rank251Aligned Residues347
% Identity13%Templated1ohwa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110........ .120.........130.........140.........150.........160.........170.........180..
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Query Sequence  SSIVPLSKSTPDVEA. PSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGSVVTADDIIITSGCHNSMS
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Template Sequence  NRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGM. SQLITMACGSCSNE
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SST
SS
BT

GGG



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TTTGGGG

TT
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   63......70.........80.........90.........100.........110.........120....... ..130.........140.
 
   183.... ..190.........200.........210.........220.......
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Query Sequence  LALMA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . VCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGI. . . . . .
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Template Sequence  NAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP
Template Known Secondary structure  TT



TT
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   142.......150.........160.........170.........180.........190.........200.........210.........220.
 
   228.230........ .240.........250.........260.........270.........280...
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Query Sequence  . . . . . . . . . . . . . . . . . . . SVEALELALEQ. . . . . WPIKGIILVPNCNNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVY
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Template Sequence  RLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQ
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SSGGG
TT


SSB
TTT
B


TT

TT
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   222.......230.........240.........250.........260.........270.........280.........290.........300.
 
   284.....290.........300.........310.........320.........330.........340.........350.........360...
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Query Sequence  GELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAAATFVLEGHYHR
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Template Sequence  TGGGSTGKFWAHEHWGLDDPADVM. . TFSKKMM. . . . TGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKRED
Template Known Secondary structure  T
SSTTSSSSGGGGG

SS

S..
GGGS....S
GGGS
SSTTSS

S
SS
TT
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   302.......310.........320..... ....330.. .......340.........350.........360.........370.....
 
   364.....370.........380.........390.........400.........410.........420.........430.........440...
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Query Sequence  HIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVARQLCRMKIQVAAGSIFSASGKYRNCLR
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Template Sequence  LLSNAAHAGKVLLTGLLDLQARY. . PQFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG. . . . . . . . DKSIR
Template Known Secondary structure 
..TTT
TT
SSTT
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   376...380.........390........ .400.........410.........420.........430.........440 .....
 
   444... ..450.........460.......
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Query Sequence  INCA. LPLSETYREALKQIGEAVYR
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Template Sequence  FRPTLVFRDHHAHLFLNIFSDILAD
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TT

T
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   446...450.........460.........470
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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