Job Description P39389 Confidence 100.00% Date Thu Jan 5 12:00:20 GMT 2012 Rank 15 Aligned Residues 359 % Identity 17% Template d1m7ya_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.60

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.				.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.																																													.	.	.
Query SS confidence																	.	.	.	.	.	.																																													.	.	.
Query Sequence		S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	.	.	.	.	.	.	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	.	.	.	G	S	V	V	T	A	D	D	I	I	I	T
Query Conservation																	.	.	.	.	.	.																																													.	.	.
Alig confidence																	.	.	.	.	.	.																																													.	.	.
Template Conservation
Template Sequence		N	G	I	I	Q	M	G	L	A	E	N	Q	L	C	F	D	L	L	E	S	W	L	A	K	N	P	E	A	A	A	F	K	K	N	G	E	S	I	F	A	E	L	A	L	F	Q	D	Y	H	G	L	P	A	F	K	K	A	M	V	D	F	M	A	E	I	R	G	N	K	V	T	F	D	P	N	H	L	V	L	T
Template Known Secondary structure		T	S	B				S	S					S														T	G	G	G	T			T	T													T	T																	T	T	T	S	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.			.	.	.	.	230	.	.	.	.	.	.	.	.					.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																								.														.	.														.	.	.	.
Query SS confidence																																								.														.	.														.	.	.	.
Query Sequence		S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	.	G	V	K	V	I	E	I	P	T	D	P	E	T	.	.	G	I	S	V	E	A	L	E	L	A	L	E	Q	.	.	.	.	W	P	I	K	G	I	I	L	V
Query Conservation																																								.														.	.														.	.	.	.
Alig confidence																																								.														.	.														.	.	.	.
Template Conservation
Template Sequence		A	G	A	T	S	A	N	E	T	F	I	F	C	L	A	D	P	G	E	A	V	L	I	P	T	P	Y	Y	P	G	F	D	R	D	L	K	W	R	T	G	V	E	I	V	P	I	H	C	T	S	S	N	G	F	Q	I	T	E	T	A	L	E	E	A	Y	Q	E	A	E	K	R	N	L	R	V	K	G	V	L	V
Template Known Secondary structure																		T	T								S			T	T					T	T	T	T	T											G	G	G	T	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.											.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.															.
Query SS confidence																																																									.	.	.	.	.	.	.	.	.	.															.
Query Sequence		P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	.	.	.	.	.	.	.	.	.	.	G	R	V	L	L	C	S	S	F	S	K	S	I	A	.
Query Conservation																																																									.	.	.	.	.	.	.	.	.	.															.
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.															.
Template Conservation
Template Sequence		T	N	P	S	N	P	L	G	T	T	M	T	R	N	E	L	Y	L	L	L	S	F	V	E	D	K	G	I	H	L	I	S	D	E	I	Y	S	G	T	A	F	S	S	P	S	F	I	S	V	M	E	V	L	K	D	R	N	C	D	E	N	S	E	V	W	Q	R	V	H	V	V	Y	S	L	S	K	D	L	G	L
Template Known Secondary structure			S	S		T	T	T																				T								T	T	G	G	G			S	S	S									T	T	T	T	T		S	S	S	S	S	G	G	G	G							S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	.	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R
Query Conservation																																															.
Alig confidence																																															.																										.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		P	G	F	R	V	G	A	I	Y	S	N	D	D	M	V	V	A	A	A	T	K	M	S	S	F	G	L	V	S	S	Q	T	Q	H	L	L	S	A	M	L	S	D	K	K	L	T	K	N	Y	I	A	E	N	H	K	R	L	K	Q	R	Q	K	K	L	V	S	G	L	Q	K	S	.	.	.	G	I	S	C	L	N
Template Known Secondary structure		G	G	G								S												G	G	G	S																																												T	T	.	.	.	T
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.
		396	.	.	.	400	.	.	.	.	.	.	.	.	.							410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.														.
Query SS confidence																.	.	.	.	.	.														.
Query Sequence		P	K	G	G	F	L	L	W	I	E	L	P	E	Q	.	.	.	.	.	.	V	D	M	V	C	V	A	R	Q	L	C	R	M	.	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation																.	.	.	.	.	.														.
Alig confidence																.	.	.	.	.	.														.															.	.
Template Conservation																																																		.	.
Template Sequence		G	N	A	G	L	F	C	W	V	D	M	R	H	L	L	R	S	N	T	F	E	A	E	M	E	L	W	K	K	I	V	Y	E	V	H	L	N	I	S	P	G	S	S	C	H	C	T	E	.	.	P	G	W	F	R	V	C	F	A	N	L	P	E	R	T	L	D	L	A	M	Q	R	L	K	A	F	V	G	E
Template Known Secondary structure				S	S	S							G	G	G	S	S	S	S	S														T	S							G	G	G	G	T		S	S	.	.	T	T							S	S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.			.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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