Job Description P39389 Confidence 99.85% Date Thu Jan 5 12:00:20 GMT 2012 Rank 178 Aligned Residues 363 % Identity 11% Template d1js3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Pyridoxal-dependent decarboxylase Resolution 2.25

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		D	Q	V	L	D	M	L	E	A	H	S	D	S	S	I	V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																																	.	.																									.	.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		Q	D	V	E	K	I	I	M	P	G	V	T	H	W	H	S	P	Y	F	F	A	Y	F	P	T	A	S	S	Y	P	A	M	L	A	D	M	L	C	G	A	I	G	C	I	G	F	S	.	.	W	A	A	S	P	A	C	T	E	L	E	T	V	M	M	D	W	L	G	K	M	L	Q	L	P	E	A	F	L	A	G
Template Known Secondary structure							T	T	G	G	G				T	T	S	T	T	B		S	S	S																							S	S	.	.	G	G	G																			T	T			G	G	G			T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	A	G	E	G	G	G	V	I	Q	G	S	A	S	E	A	T	L	V	A	L	L	A	A	R	T	K	V	V	R	R	L	Q	A	A	S	P	G	L	T	Q	G	A	V	L	E	K	L	V	A	Y	A	S	D	Q	A	H	S	S	V	E	R	A	G	L	I	G	G	V	K	L	K	A	I	P	S	D	G	K	F
Template Known Secondary structure		T	T		S							S																									S	T	T																T	T													T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	.	.	.	.	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																		.	.	.
Template Conservation																																								.	.	.
Template Sequence		A	M	R	A	S	A	L	Q	E	A	L	E	R	D	K	A	A	G	L	I	P	F	F	V	V	A	T	L	G	T	T	S	C	C	S	F	D	N	.	.	.	L	L	E	V	G	P	I	C	H	E	E	D	I	W	L	H	V	D	A	A	Y	A	G	S	A	F	I	C	P	E	F	R	H	L	L	N	G	V	E
Template Known Secondary structure																		T	T										B	S		T	T	T			B			.	.	.											T	T								T	T	G	G	G	G	G	G	S	T	T	T	G	G	G	G	T	T	G	G
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.											.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	.	.	.	.	.	.	.	.	.	.	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I
Query Conservation																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		F	A	D	S	F	N	F	N	P	H	K	W	L	L	V	N	F	D	C	S	A	M	W	V	K	R	R	T	D	L	T	G	A	F	K	S	G	L	I	T	D	Y	R	H	W	Q	L	P	L	G	R	R	F	R	S	L	K	M	W	F	V	F	R	M	Y	G	V	.	.	.	.	K	G	L	Q	A	Y	I	R	K
Template Known Secondary structure		G		S										S	S			S	S							S							G	G	G				S				G	G	G	S	S	S		S					T														.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.					360	.	.	.	.	.	.	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.			.
Predicted Secondary structure																									.																																																						.	.
Query SS confidence																									.																																																						.	.
Query Sequence		Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	.	R	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	.	.	L
Query Conservation																									.																																																						.	.
Alig confidence																	.	.							.																																							.	.	.	.												.	.
Template Conservation																	.	.																																														.	.	.	.
Template Sequence		H	V	Q	L	S	H	E	F	E	A	F	V	L	Q	D	.	.	P	R	F	E	V	C	A	E	V	T	L	G	L	V	C	F	R	L	K	G	S	D	G	L	N	E	A	L	L	E	R	I	N	S	A	R	K	I	H	L	V	P	C	R	L	.	.	.	.	R	G	Q	F	V	L	R	F	A	I	C	S	R	K
Template Known Secondary structure																	.	.	T	T					S				S	S							S	S																T	S		B							.	.	.	.	T	T											T	T
Template Predicted Secondary structure																	.	.																																														.	.	.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440					.	.	.	.	.	.	.	.	.	450	.	.	.	.
		449	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	S	G	H	V	R	L	A	W	E	H	I	R	G	L	A	A	E	L	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions