Return to main results Retrieve Phyre Job Id

Job DescriptionP39389
Confidence96.94%DateThu Jan 5 12:00:20 GMT 2012
Rank265Aligned Residues41
% Identity32%Templated1j5ya1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Biotin repressor-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.........50..... ....60.........
Predicted Secondary structure 





.






Query SS confidence 



























.













Query Sequence  SVRSLSQEHGVSISTVQQAYQTLETMKL. ITPQPRSGYFVAQR
Query Conservation 
 
 

  
 

  

  

  
   
 .
    
 



   
Alig confidence 



























.





.






Template Conservation 
  


  
 

 


 


  
   
  
     .

 
  
Template Sequence  SGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPR. GYVLAGG
Template Known Secondary structure 
TS
T


TT.



Template Predicted Secondary structure 








.




Template SS confidence 










































   26...30.........40.........50.........60 .......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions