Job Description P39389 Confidence 99.94% Date Thu Jan 5 12:00:20 GMT 2012 Rank 106 Aligned Residues 328 % Identity 15% Template d1h0ca_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.5

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		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	I	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G
Query Conservation
Alig confidence																																.	.	.	.	.																.	.	.	.
Template Conservation																																.	.	.	.	.																.	.	.	.
Template Sequence		G	P	G	P	S	N	L	P	P	R	I	M	A	A	G	G	L	Q	M	I	G	S	M	S	K	D	M	Y	Q	I	.	.	.	.	.	M	D	E	I	K	E	G	I	Q	Y	V	F	Q	T	R	.	.	.	.	N	P	L	T	L	V	I	S	G	S	G	H	C	A	L	E	A	A	L	V	N	V	L	E	P	G
Template Known Secondary structure		S	S	S													T						T	T	S							.	.	.	.	.													T			.	.	.	.		S						S	S																S	S
Template Predicted Secondary structure																																.	.	.	.	.																.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R
Query Conservation
Alig confidence																																																									.												.	.	.
Template Conservation																																																									.												.	.	.
Template Sequence		D	S	F	L	V	G	A	N	G	I	W	G	Q	R	A	V	D	I	G	E	R	I	G	V	H	P	M	T	K	D	P	G	G	H	Y	T	L	Q	E	V	E	E	G	L	A	Q	H	K	P	V	L	L	F	L	T	.	H	G	E	S	S	T	G	V	L	Q	P	.	.	.	L	D	G	F	G	E	L	C	H	R
Template Known Secondary structure								B	S	S																B			B			T	T																		S						.	S			T	T	T	T					.	.	.		T	T							T
Template Predicted Secondary structure																																																									.												.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.				.	.	.	.	.	.	170	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.		.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	.	V	A	P	G	R	Y	H	D	K	L	M	H	M	K	Y	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.																.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.																										.																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.
Template Sequence		Y	K	C	L	L	L	V	D	S	V	A	S	L	G	G	T	P	L	Y	.	.	.	.	.	.	.	M	D	R	Q	G	I	D	I	L	Y	S	G	S	Q	K	A	L	N	A	P	P	G	T	S	L	I	S	F	S	D	K	A	K	K	K	M	Y	S	R	K	T	K	P	F	S	F	Y	L	D	I	K	W	L	A
Template Known Secondary structure		T	T								T	T	T	T	T	T	S				.	.	.	.	.	.	.	T	T	T	T	T		S						S	S	S	T	T				T	T															T	T		S	S			S		S	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
											339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400					.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																																															.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																																															.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	G	G	F	.	.	.	.	L	L	W	I	E
Query Conservation		.	.	.	.	.	.	.	.	.																																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																																																	.	.	.												.	.	.	.
Template Conservation																																																											.	.	.
Template Sequence		N	F	W	G	C	D	D	Q	P	R	M	Y	H	H	T	I	P	V	I	S	L	Y	S	L	R	E	S	L	A	L	I	A	E	Q	G	L	E	N	S	W	R	Q	H	R	E	A	A	A	Y	L	H	G	R	L	Q	A	L	.	.	.	G	L	Q	L	F	V	K	D	P	A	L	R	L	P	T	V	T	T	V	A
Template Known Secondary structure				T	T		S	S	S						S																																												.	.	.	T			B	S	S		S	G	G	G	B		T	T
Template Predicted Secondary structure																																																											.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.			.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																			.																									.	.
Query SS confidence																			.																									.	.
Query Sequence		L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	.	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	.	.	A	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation																			.																									.	.
Alig confidence																			.															.	.	.	.							.	.
Template Conservation																																		.	.	.	.
Template Sequence		V	P	A	G	Y	D	W	R	D	I	V	S	Y	V	I	D	H	F	D	I	E	I	M	G	G	L	G	P	S	T	G	K	.	.	.	.	V	L	R	I	G	L	L	G	C	N	A	T	R	E	N	V	D	R	V	T	E	A	L	R	A	A	L	Q	H
Template Known Secondary structure				T	T																							G	G	G	T	T	T	.	.	.	.								G	G	G		S
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.					.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions