Job Description P39389 Confidence 99.72% Date Thu Jan 5 12:00:20 GMT 2012 Rank 223 Aligned Residues 282 % Identity 13% Template d1ejia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.90

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		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.											.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.													.
Query Sequence		S	G	C	H	N	S	M	S	L	A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	.	.	.	.	.	.	.	.	.	.	K	V	I	E	I	P	T	D	P	E	T	G	.	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G
Query Conservation																																										.	.	.	.	.	.	.	.	.	.													.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	E	P	H	G	R	I	X	G	L	D	L	P	D	G	G	H	L	T	H	G	F	X	T	D	K	K	K	I	S	A	T	S	I	F	F	E	S	X	P	Y	K	V	Y	P	E	T	G	Y	I	N	Y	D	Q	L	E	E	N	A	S	L	F	H	P	K	L
Template Known Secondary structure		S	S													T		T	T								G	G	G	T			G	G	G			B		S	S		B		S						S							B		T	T	T		S	B															S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	.	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G
Query Conservation																																												.
Alig confidence					.	.	.	.	.											.																								.																.	.	.	.	.
Template Conservation					.	.	.	.	.											.																																								.	.	.	.	.
Template Sequence		I	I	A	.	.	.	.	.	G	T	S	C	Y	S	R	N	L	D	.	Y	A	R	L	R	K	I	A	D	D	N	G	A	Y	L	X	A	D	X	A	H	I	S	G	L	V	A	A	G	V	V	P	S	P	F	E	H	C	H	.	.	.	.	.	V	V	T	T	T	T	H	K	T	L	R	G	C	R	A	G	X
Template Known Secondary structure					.	.	.	.	.			S	S			S				.											T	T								G	G	G						T	T	S	S			G	G	G	T		S	.	.	.	.	.						S	S	G	G	G				S
Template Predicted Secondary structure					.	.	.	.	.											.																																								.	.	.	.	.
Template SS confidence
		198	.	200						.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.						250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		323	.	.	.	.																.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	V	A	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																												.
Template Conservation																																																																																	.
Template Sequence		I	F	Y	R	K	G	V	R	S	V	D	P	K	T	G	K	E	T	Y	Y	E	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	X	T	T	E	F	K	I	Y	Q	L	Q	V	L	A	N	C	R	A	L	S	D	A	L	T	E	L	.
Template Known Secondary structure													S	T	T																	T	T	T	T			S																	T	S																								T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.		.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.						.	.	450	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.												.																											.														.	.	.	.	.
Query SS confidence												.												.																											.														.	.	.	.	.
Query Sequence		P	C	E	I	C	I	T	R	P	K	.	G	G	F	L	L	W	I	E	L	P	E	.	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	.	S	G	K	Y	R	N	C	L	R	I	N	C	A	.	.	.	.	.	L	P	L	S	E	T	Y	R	E	A	L	K
Query Conservation												.												.																											.														.	.	.	.	.
Alig confidence		.	.									.												.																											.														.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	X	D	L	R	S	K	G	T	D	G	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	E	D	F	Q	K	V	A	H
Template Known Secondary structure		.	.	T			B	T	T	S	S		S	S	S						G	G	G	G	T													T	T				B					S	S	S	S		T	T	S		S											T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
		460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	G	E	A	V	Y	R	A	M	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	I	H	R	G	I	E	L	T	L	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		424	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions