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Job DescriptionP39389
Confidence99.94%DateThu Jan 5 12:00:20 GMT 2012
Rank110Aligned Residues374
% Identity11%Templated1bs0a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50......... 60.........70.........80.........90.........100.........110.....
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Query Sequence  ISTVQQAYQTLETMKLITPQ. . . . PRSGYFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLEAHSDSSIVPLSKSTPD
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Template Sequence  QEKINAALDARRAADALRRRYPVAQGAGRWL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VADDRQYLNFSSNDY.
Template Known Secondary structure 

GGG







SB
SSS.................................TT
S


T.
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   4.....10.........20.........30.... .....40.........
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  VEAPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGSVVTADDIIITSGCHNSMSLALMAVCKPGDIV
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Template Sequence  LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEW. . . LGYSRALLFISGFAANQAVIAAMMAKEDRI
Template Known Secondary structure  TSGGG

S


SBTTTT


...T
SS


TT
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   50.........60.........70.........80.........90...... ...100.........110.........120......
 
   196...200.........210.........220.........230.........240.. .......250.........260.........270....
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Query Sequence  AVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIK. GIILVPNCNNPLGFIMPDARKRAVLSLAQRHD
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Template Sequence  AADRLSHASLLEAASLSPSQLRRFAHN. . . . . DVTHLARLLASPCPGQQMVVTEGVFSMDGDSAP. . . LAEIQQVTQQHN
Template Known Secondary structure  TT

TSSS
TT.....
S

SS
SB
TTT

B

...TT
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   127..130.........140.........150... ......160.........170.........180...... ...190........
 
   275....280.........290.........300.........310.........320.........330.........340.........350....
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Query Sequence  IVIFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAISSFNVPSTQMAAAT
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Template Sequence  GWLMVDDAHGTGVIGEQGRGSCWLQKV. KPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALR
Template Known Secondary structure 

TTTTTTSSGGG

TT
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SSSSTTSS



SSB


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   199200.........210.........220..... ....230.........240.........250.........260.........270.......
 
   355....360.........370.........380.........390.........400.........410.........420.........430....
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Query Sequence  FVLEGHYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVARQLCRMKIQVAAGSIFSA
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Template Sequence  ASLAVIRSDEGDARREKLAALITRFRAGVQDL. . . PFTLADSCS. AIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPT.
Template Known Secondary structure  STTS...S

S

S.SB

STT


TTS.
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   278.280.........290.........300......... 310........ .320.........330.........340.........350..
 
   435....440....... ..450.........460....
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Query Sequence  SGKYRNCLRINCA. LPLSETYREALKQIGEA
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Template Sequence  VPAGTARLRLTLTAAHEMQDIDRLLEVLHGN
Template Known Secondary structure  S
TT


B

TT

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   353......360.........370.........380...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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