Return to main results Retrieve Phyre Job Id

Job DescriptionP39389
Confidence100.00%DateThu Jan 5 12:00:20 GMT 2012
Rank49Aligned Residues351
% Identity23%Templated1b5pa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases AAT-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SDSSIVPLSKSTPDVEAPSLKPLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDS. GSVVTADDIIITSGCHNS
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Template Sequence  QGVDLVALTAGEPDFDTPE. . . . . HVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQA
Template Known Secondary structure  TT





SS
SS


.....TT

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TT

TT




GGGS
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   2930.........40....... ..50.........60.........70.........80.........90.........100...
 
   181........190.........200.........210.........220.........230.........240.........250.........260
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Query Sequence  MSLALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIKGIILVPNCNNPLGFIMPD
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Template Conservation 
      
   

 

   
 
          
   
                                  

 
     
Template Sequence  LFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK
Template Known Secondary structure 

TT
S

TTT


GGGTT


TT

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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   261........270.........280.........290.........300.........310.........320.........330.........340
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Query Sequence  ARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDIDGRVLLCSSFSKSIAPGLRVGWVAPGRYHDKLMHMKYAI
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Template Sequence  EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQS
Template Known Secondary structure  TT

TTTT
BSSS



GGGT
TTTSTTTTT
GGG



TT
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   184.....190.........200.........210.........220.........230.........240.........250.........260...
 
   341........350......... 360.........370.........380.........390.........400...... ...410........
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Query Sequence  SSFNVPSTQMAAATFVLEG. HYHRHIRRMRQIYQRNLALYTCWIREYFPCEICITRPKGGFLLWIEL. PEQVDMVCVARQ
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Template Sequence  TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL. . . GLKAVRPSGAFYVLMDTSPIAPDEVRAAER
Template Known Secondary structure  T
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...T

B


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   264.....270.........280.........290.........300.........310 .........320.........330.........340
 
   419420.........430.........440.........450.........460.....
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Query Sequence  LCRMKIQVAAGSIFSASGKYRNCLRINCALPLSETYREALKQIGEAV
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Template Sequence  LLEAGVAVVPGTDFAAFG. . . . HVRLSYAT. SEENLRKALERFARVL
Template Known Secondary structure  TT
SGGGT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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