Job Description P39389 Confidence 100.00% Date Thu Jan 5 12:00:20 GMT 2012 Rank 55 Aligned Residues 366 % Identity 16% Template d1ajsa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 1.60

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																														.	.																																																		.
Query SS confidence																														.	.																																																		.
Query Sequence		V	E	I	T	Q	W	D	Q	V	L	D	M	L	E	A	H	S	D	S	S	I	V	P	L	S	K	S	T	.	.	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	.
Query Conservation																														.	.																																																		.
Alig confidence																														.	.																																																		.
Template Conservation
Template Sequence		A	Q	P	V	L	V	F	K	L	I	A	D	F	R	E	D	P	D	P	R	K	V	N	L	G	V	G	A	Y	R	T	D	D	C	Q	P	W	V	L	P	V	V	R	K	V	E	Q	R	I	A	N	N	S	S	L	N	H	E	Y	L	P	I	L	G	L	A	E	F	R	T	C	A	S	R	L	A	L	G	D	D
Template Known Secondary structure																T				T	T						S						T	T	S																	T		T	T								T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		163	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.								.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230
Predicted Secondary structure											.	.																		.	.	.	.	.	.	.																																		.	.	.
Query SS confidence											.	.																		.	.	.	.	.	.	.																																		.	.	.
Query Sequence		G	S	V	V	T	A	D	D	I	.	.	I	I	T	S	G	C	H	N	S	M	S	L	A	L	M	A	V	.	.	.	.	.	.	.	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	.	.	.	D	P	E	T	G	I	S	V	E
Query Conservation											.	.																		.	.	.	.	.	.	.																																		.	.	.
Alig confidence											.	.																		.	.	.	.	.	.	.																																		.	.	.
Template Conservation
Template Sequence		S	P	A	L	Q	E	K	R	V	G	G	V	Q	S	L	G	G	T	G	A	L	R	I	G	A	E	F	L	A	R	W	Y	N	G	T	N	N	K	D	T	P	V	Y	V	S	S	P	T	W	E	N	H	N	G	V	F	T	T	A	G	F	K	D	I	R	S	Y	R	Y	W	D	T	E	K	R	G	L	D	L	Q
Template Known Secondary structure							T	T																									S	S	S	S	S				S							S			T									T	T		S										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		231	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure										.																																																						.	.	.
Query SS confidence										.																																																						.	.	.
Query Sequence		A	L	E	L	A	L	E	Q	.	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D	A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	.	.	.	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L
Query Conservation										.																																																						.	.	.
Alig confidence										.																																																						.	.	.
Template Conservation
Template Sequence		G	F	L	S	D	L	E	N	A	P	E	F	S	I	F	V	L	H	A	C	A	H	N	P	T	G	T	D	P	T	P	E	Q	W	K	Q	I	A	S	V	M	K	R	R	F	L	F	P	F	F	D	S	A	Y	Q	G	F	A	S	G	N	L	E	K	D	A	W	A	I	R	Y	F	V	S	E	G	F	E	L	F
Template Known Secondary structure										S		T	T							S	S	S		T	T	T																				T								S		T	T	T	T	T	S						T									T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		307	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.									.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure												.												.	.	.	.	.	.	.	.																																			.	.	.	.
Query SS confidence												.												.	.	.	.	.	.	.	.																																			.	.	.	.
Query Sequence		L	C	S	S	F	S	K	S	I	A	.	P	G	L	R	V	G	W	V	A	P	G	.	.	.	.	.	.	.	.	R	Y	H	D	K	L	M	H	M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	.	.	.	.	H	R	H	I	R	R	M	R	Q	I	Y	Q
Query Conservation												.												.	.	.	.	.	.	.	.																																			.	.	.	.
Alig confidence												.												.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation
Template Sequence		C	A	Q	S	F	S	K	N	F	G	L	Y	N	E	R	V	G	N	L	T	V	V	A	K	E	P	D	S	I	L	R	V	L	S	Q	M	Q	K	I	V	R	V	T	W	S	N	P	P	A	Q	G	A	R	I	V	A	R	T	L	S	D	P	E	L	F	H	E	W	T	G	N	V	K	T	M	A	D	R	I	L
Template Known Secondary structure							T	T	T	S			G	G	G										S	S																	T	T	T	S	S			S												S
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	.	I	C	I	T	R	P	K	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M	V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	L	P	L	S	E
Query Conservation																			.
Alig confidence																			.																		.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	M	R	S	E	L	R	A	R	L	E	A	L	K	T	P	G	T	W	N	H	I	T	D	Q	I	G	M	F	S	F	T	G	L	N	.	.	.	.	P	K	Q	V	E	Y	L	I	N	Q	K	H	I	Y	L	L	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	R	I	N	M	C	G	L	T	T	K
Template Known Secondary structure														T	T		S	S										S	S								.	.	.	.										T	T						T	T	S	.	.	.	.	.	.	.	.	.	.	.	.				G	G	G			T	T
Template Predicted Secondary structure																																					.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.					.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.													.	.	.	.	390	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	L	D	Y	V	A	T	S	I	H	E	A	V	T	K
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions