 |
Job Description | P39389 | Confidence | 99.69% | Date | Thu Jan 5 12:00:20 GMT 2012 |
Rank | 233 | Aligned Residues | 64 |
% Identity | 36% | Template | c3tqnC_ |
PDB info |
PDB header:transcription | Chain: C: PDB Molecule:transcriptional regulator, gntr family; |
PDBTitle: structure of the transcriptional regulator of the gntr family, from2 coxiella burnetii.
|
Resolution | 2.80 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | Y | Q | H | L | A | T | L | L | A | E | R | I | E | Q | G | L | Y | R | H | G | E | K | L | P | S | V | R | S | L | S | Q | E | H | G | V | S | I | S | T | V | Q | Q | A | Y | Q | T | L | E | T | M | K | L | I | T | P | Q | P | R | S | G | Y | F | V | A | Q | R |
Query Conservation |   |
  |   |
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |
|
|
|
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
|
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|   |   |   |   |
|
|   |   |
|
| . |
|
|   |   |   |
|   |   |   |
|   |
|   | . | . | . |   |   |
|   |   |
|   |   |   |
Template Sequence |   |
P | I | Y | Q | Q | L | R | D | K | I | V | E | A | I | I | D | G | S | Y | V | E | G | E | X | I | P | S | I | R | K | I | S | T | E | Y | Q | I | N | P | L | T | V | . |
S | A | Y | Q | S | L | L | D | D | N | V | I | E | . |
. |
. |
K | L | G | X | L | V | K | A | G |
Template Known Secondary structure |   |
S | S | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| B | T | S | B |
|
|
|  |  |  |  |  |  |  | T | T |
|
| S | S | S |
| . |
|
|  |  |  |  |  |  | T | T | S |  |  | . | . | . |
|
|
|
|  |  |
| T | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |
|
|
|  |  | . | . | . |
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | . | . | |
|
|
. | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|