Job Description P39389 Confidence 99.79% Date Thu Jan 5 12:00:20 GMT 2012 Rank 202 Aligned Residues 313 % Identity 11% Template c3qm2A_ PDB info PDB header:transferase Chain: A: PDB Molecule:phosphoserine aminotransferase; PDBTitle: 2.25 angstrom crystal structure of phosphoserine aminotransferase2 (serc) from salmonella enterica subsp. enterica serovar typhimurium Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		I	V	P	L	S	K	S	T	P	D	V	E	A	P	S	L	K	P	L	W	R	E	L	S	R	V	V	Q	H	N	L	Q	T	V	L	G	Y	D	L	L	A	G	Q	R	V	L	R	E	Q	I	A	R	L	M	L	D	S	G	S	V	V	T	A	D	D	.	.	I	I	I	T	S	G	C	H	N	S	M	S	L
Query Conservation																																																																			.	.
Alig confidence													.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.						.	.
Template Conservation													.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Sequence		V	F	N	F	S	S	G	P	A	M	L	.	.	.	P	A	E	V	L	K	L	A	Q	Q	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	E	A	E	Q	D	F	R	D	L	L	N	.	.	.	.	.	I	P	S	N	Y	K	V	L	F	C	H	G	G	G	R	G	Q	F	A	G
Template Known Secondary structure							S	S	S				.	.	.									T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	.	.	.	.	.			T	T								S		T	T
Template Predicted Secondary structure													.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.																	.	.	.	30	.	.	.	.	.	.	.	.	.						40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		A	L	M	A	V	C	K	P	G	D	I	V	A	V	E	S	P	C	Y	Y	G	.	.	.	S	M	Q	M	L	R	G	M	G	V	K	V	I	E	I	P	T	D	P	E	T	G	I	S	V	E	A	L	E	L	A	L	E	Q	W	P	I	K	G	I	I	L	V	P	N	C	N	N	P	L	G	F	I	M	P	D
Query Conservation																							.	.	.
Alig confidence																							.	.	.																																												.												.
Template Conservation																																																																					.												.
Template Sequence		V	P	L	N	L	L	G	D	K	T	T	A	D	Y	V	D	A	G	Y	W	A	A	S	A	I	K	E	A	K	K	Y	C	A	P	Q	I	I	D	A	K	I	T	V	D	G	K	R	A	V	K	P	M	R	E	W	Q	L	S	D	N	A	A	Y	L	H	Y	C	.	P	N	E	T	I	D	G	I	A	I	D	.
Template Known Secondary structure								T	T									S	S											T	T	T	S												T	T							G	G	G					T	T		S						.	S			T	T	T	T					.
Template Predicted Secondary structure																																																																					.												.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		A	R	K	R	A	V	L	S	L	A	Q	R	H	D	I	V	I	F	E	D	D	V	Y	G	E	L	A	T	E	Y	P	R	P	R	T	I	H	S	W	D	I	D	G	R	V	L	L	C	S	S	F	S	K	S	I	A	P	G	L	R	V	G	W	V	A	P	G	R	Y	H	D	K	L	M	H	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence		.	.	.	.							.	.																		.	.	.	.	.	.	.	.	.																																						.	.	.	.	.
Template Conservation		.	.	.	.							.	.																		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	E	T	P	D	F	G	.	.	P	E	V	V	V	T	A	D	F	S	S	T	I	L	S	A	P	.	.	.	.	.	.	.	.	.	L	D	V	S	R	Y	G	V	I	Y	A	G	A	Q	K	N	I	G	P	A	G	L	T	L	V	I	V	R	E	D	L	L	G	K	A	H	E	S	C	P	S	I
Template Known Secondary structure		.	.	.	.							.	.	T	T								T	T	T	T	T	S	S		.	.	.	.	.	.	.	.	.			G	G	G		S						T	T	T	T	T			T	T								G	G	G		S				T	T	S		G	G
Template Predicted Secondary structure		.	.	.	.							.	.																		.	.	.	.	.	.	.	.	.
Template SS confidence
						161	.	.	.	.	.			.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.				.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		M	K	Y	A	I	S	S	F	N	V	P	S	T	Q	M	A	A	A	T	F	V	L	E	G	H	Y	H	R	H	I	R	R	M	R	Q	I	Y	Q	R	N	L	A	L	Y	T	C	W	I	R	E	Y	F	P	C	E	I	C	I	T	R	P	K	.	.	.	G	G	F	L	L	W	I	E	L	P	E	Q	V	D	M
Query Conservation																																																																.	.	.
Alig confidence																																																					.	.										.	.	.
Template Conservation																																																					.	.
Template Sequence		L	D	Y	T	V	L	N	D	N	P	T	F	A	W	Y	L	S	G	L	V	F	K	W	L	K	A	Q	G	G	V	A	A	M	H	K	I	N	Q	Q	K	A	E	L	L	Y	G	V	I	D	N	S	.	.	D	F	Y	R	N	D	V	A	Q	A	N	R	S	R	M	N	V	P	F	Q	L	A	D	N	T	L	D
Template Known Secondary structure		G											S																T																						T		.	.	S	S					B		G	G	G	B		S	S							S	S	G	G	G
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.		.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		V	C	V	A	R	Q	L	C	R	M	K	I	Q	V	A	A	G	S	I	F	S	A	S	G	K	Y	R	N	C	L	R	I	N	C	A	.	L	P	L	S	E	T	Y	R	E	A	L	K	Q	I	G	E	A	V	Y	R
Query Conservation																																					.
Alig confidence																						.	.	.	.	.	.										.
Template Conservation																						.	.	.	.	.	.
Template Sequence		K	V	F	L	E	E	S	F	A	A	G	L	H	A	L	K	G	H	R	V	.	.	.	.	.	.	V	G	G	M	R	A	S	I	Y	N	A	M	P	I	E	G	V	K	A	L	T	D	F	M	I	D	F	E	R	R
Template Known Secondary structure											T	T					B			T	T	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330							.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions